RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 MED23Q9ULK4 1368 aa18.82■□□□□ 0.6
SLC6A1-203ENST00000460480 ANGEL2Q5VTE6 544 aaKnown RBP18.82■□□□□ 0.6
SLC6A1-203ENST00000460480 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
SLC6A1-203ENST00000460480 CDCA5Q96FF9 252 aa18.82■□□□□ 0.6
SLC6A1-203ENST00000460480 PITPNM2Q9BZ72 1349 aa18.81■□□□□ 0.6
SLC6A1-203ENST00000460480 KIF23Q02241 960 aaPredicted RBP18.81■□□□□ 0.6
SLC6A1-203ENST00000460480 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
SLC6A1-203ENST00000460480 LEMD3Q9Y2U8 911 aa18.81■□□□□ 0.6
SLC6A1-203ENST00000460480 CASP8AP2Q9UKL3 1982 aa18.81■□□□□ 0.6
SLC6A1-203ENST00000460480 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 ITGA6P23229 1130 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 RGS19P49795 217 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 ZNF157P51786 506 aaPredicted RBP18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 STRIP1Q5VSL9 837 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 COA1Q9GZY4 146 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 MYH3P11055 1940 aa18.8■□□□□ 0.6
SLC6A1-203ENST00000460480 SLC10A3P09131 477 aa18.79■□□□□ 0.6
SLC6A1-203ENST00000460480 NBPF9Q3BBW0 867 aa18.79■□□□□ 0.6
SLC6A1-203ENST00000460480 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
SLC6A1-203ENST00000460480 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
SLC6A1-203ENST00000460480 IRS2Q9Y4H2 1338 aa18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 KLRK1P26718 216 aa18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 FOXO4P98177 505 aa18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 EXOSC9Q06265 439 aaKnown RBP18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 MCOLN1Q9GZU1 580 aa18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 ZNF646O15015 1829 aaPredicted RBP18.78■□□□□ 0.6
SLC6A1-203ENST00000460480 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 TNRC18O15417 2968 aaPredicted RBP18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 WNT10BO00744 389 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 FKBP1BP68106 108 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 SAGE1Q9NXZ1 904 aa18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 SCAF8Q9UPN6 1271 aaKnown RBP18.77■□□□□ 0.6
SLC6A1-203ENST00000460480 CACNA1FO60840 1977 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 MMP14P50281 582 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 TTLL5Q6EMB2 1281 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 ZBED3Q96IU2 234 aaPredicted RBP18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 RNF186Q9NXI6 227 aa18.76■□□□□ 0.59
SLC6A1-203ENST00000460480 PRAMEF18Q5VWM3 479 aa18.75■□□□□ 0.59
SLC6A1-203ENST00000460480 C15orf52Q6ZUT6 534 aaKnown RBP18.75■□□□□ 0.59
SLC6A1-203ENST00000460480 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
SLC6A1-203ENST00000460480 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
SLC6A1-203ENST00000460480 SNAP23O00161 211 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 CHRNDQ07001 517 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 RASAL3Q86YV0 1011 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 OGFOD1Q8N543 542 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 MPHOSPH8Q99549 860 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
SLC6A1-203ENST00000460480 SPEF2Q9C093 1822 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 F6X3S4 739 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 TRPA1O75762 1119 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 EPHA10Q5JZY3 1008 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 CD209Q9NNX6 404 aa18.73■□□□□ 0.59
SLC6A1-203ENST00000460480 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
SLC6A1-203ENST00000460480 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
SLC6A1-203ENST00000460480 DGKZQ13574 1117 aa18.72■□□□□ 0.59
SLC6A1-203ENST00000460480 REM2Q8IYK8 340 aaPredicted RBP18.72■□□□□ 0.59
SLC6A1-203ENST00000460480 ANP32CO43423 234 aa18.71■□□□□ 0.59
SLC6A1-203ENST00000460480 GTF2IP78347 998 aa18.71■□□□□ 0.59
SLC6A1-203ENST00000460480 CERS5Q8N5B7 392 aa18.71■□□□□ 0.59
SLC6A1-203ENST00000460480 HELBQ8NG08 1087 aaPredicted RBP18.71■□□□□ 0.59
SLC6A1-203ENST00000460480 ZNF316A6NFI3 1004 aaPredicted RBP18.7■□□□□ 0.58
SLC6A1-203ENST00000460480 TAF5LO75529 589 aa18.7■□□□□ 0.58
SLC6A1-203ENST00000460480 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
SLC6A1-203ENST00000460480 PAPPA2Q9BXP8 1791 aa18.7■□□□□ 0.58
SLC6A1-203ENST00000460480 IL1R1P14778 569 aa18.69■□□□□ 0.58
SLC6A1-203ENST00000460480 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
SLC6A1-203ENST00000460480 KIAA0825Q8IV33 1275 aa18.69■□□□□ 0.58
SLC6A1-203ENST00000460480 SASH1O94885 1247 aa18.68■□□□□ 0.58
SLC6A1-203ENST00000460480 TM4SF4P48230 202 aa18.68■□□□□ 0.58
SLC6A1-203ENST00000460480 LDLRAD1Q5T700 205 aa18.68■□□□□ 0.58
SLC6A1-203ENST00000460480 MTMR14Q8NCE2 650 aa18.68■□□□□ 0.58
SLC6A1-203ENST00000460480 FBXW7Q969H0 707 aa18.68■□□□□ 0.58
SLC6A1-203ENST00000460480 GRM8O00222 908 aa18.67■□□□□ 0.58
SLC6A1-203ENST00000460480 FKBP1AP62942 108 aaKnown RBP18.67■□□□□ 0.58
SLC6A1-203ENST00000460480 KAZALD1Q96I82 304 aa18.67■□□□□ 0.58
SLC6A1-203ENST00000460480 ZNF521Q96K83 1311 aa18.67■□□□□ 0.58
SLC6A1-203ENST00000460480 AKAP11Q9UKA4 1901 aa18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 ALDH1L1O75891 902 aa18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 ZEB1P37275 1124 aaPredicted RBP18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 MLLT1Q03111 559 aaPredicted RBP18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 PTPN12Q05209 780 aaKnown RBP18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 ZNF594Q96JF6 807 aaPredicted RBP18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 HDAC9Q9UKV0 1011 aa18.66■□□□□ 0.58
SLC6A1-203ENST00000460480 KCNJ4P48050 445 aa18.65■□□□□ 0.58
SLC6A1-203ENST00000460480 APOBEC3FQ8IUX4 373 aaKnown RBP18.65■□□□□ 0.58
SLC6A1-203ENST00000460480 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
SLC6A1-203ENST00000460480 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
SLC6A1-203ENST00000460480 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
SLC6A1-203ENST00000460480 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms