RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
CDK11A-209ENST00000460465 MAP4K1Q92918 833 aa20.88■□□□□ 0.93
CDK11A-209ENST00000460465 UQCRFS1P1P0C7P4 283 aa20.88■□□□□ 0.93
CDK11A-209ENST00000460465 SLFNL1Q499Z3 407 aa20.88■□□□□ 0.93
CDK11A-209ENST00000460465 RBM8AQ9Y5S9 174 aaKnown RBP20.88■□□□□ 0.93
CDK11A-209ENST00000460465 NEK4P51957 841 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
CDK11A-209ENST00000460465 CCDC129Q6ZRS4 1044 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
CDK11A-209ENST00000460465 SERPINB2P05120 415 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 PRPF40BQ6NWY9 871 aaKnown RBP20.87■□□□□ 0.93
CDK11A-209ENST00000460465 RASEFQ8IZ41 740 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 HELLSQ9NRZ9 838 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 MINPP1Q9UNW1 487 aa20.87■□□□□ 0.93
CDK11A-209ENST00000460465 NECTIN1Q15223 517 aa20.86■□□□□ 0.93
CDK11A-209ENST00000460465 ZMYM1Q5SVZ6 1142 aa20.86■□□□□ 0.93
CDK11A-209ENST00000460465 KCNJ4P48050 445 aa20.86■□□□□ 0.93
CDK11A-209ENST00000460465 DDR1Q08345 913 aa20.85■□□□□ 0.93
CDK11A-209ENST00000460465 COL23A1Q86Y22 540 aaPredicted RBP20.85■□□□□ 0.93
CDK11A-209ENST00000460465 DOCK2Q92608 1830 aa20.85■□□□□ 0.93
CDK11A-209ENST00000460465 ST5P78524 1137 aa20.84■□□□□ 0.93
CDK11A-209ENST00000460465 LRRFIP1Q32MZ4 808 aaKnown RBP20.84■□□□□ 0.93
CDK11A-209ENST00000460465 KCNB2Q92953 911 aa20.84■□□□□ 0.93
CDK11A-209ENST00000460465 CYP2E1P05181 493 aaPredicted RBP20.84■□□□□ 0.93
CDK11A-209ENST00000460465 UPF3BQ9BZI7 483 aaKnown RBP20.84■□□□□ 0.93
CDK11A-209ENST00000460465 POLRMTO00411 1230 aaKnown RBP20.83■□□□□ 0.93
CDK11A-209ENST00000460465 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
CDK11A-209ENST00000460465 HMG20BQ9P0W2 317 aa20.83■□□□□ 0.93
CDK11A-209ENST00000460465 MAST3O60307 1309 aa20.83■□□□□ 0.92
CDK11A-209ENST00000460465 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.92
CDK11A-209ENST00000460465 BCAMP50895 628 aa20.83■□□□□ 0.92
CDK11A-209ENST00000460465 UBE4AQ14139 1066 aa20.83■□□□□ 0.92
CDK11A-209ENST00000460465 TTF1Q15361 905 aaPredicted RBP20.83■□□□□ 0.92
CDK11A-209ENST00000460465 RASGRF1Q13972 1273 aa20.82■□□□□ 0.92
CDK11A-209ENST00000460465 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
CDK11A-209ENST00000460465 PIH1D3Q9NQM4 214 aaKnown RBP20.82■□□□□ 0.92
CDK11A-209ENST00000460465 WTIPA6NIX2 430 aaPredicted RBP20.82■□□□□ 0.92
CDK11A-209ENST00000460465 SLC27A2O14975 620 aa20.82■□□□□ 0.92
CDK11A-209ENST00000460465 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 M0R2C6 588 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 HSP90AA1P07900 732 aaKnown RBP20.81■□□□□ 0.92
CDK11A-209ENST00000460465 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDK11A-209ENST00000460465 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 GRAPQ13588 217 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 FLAD1Q8NFF5 587 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 GRAPLQ8TC17 118 aaPredicted RBP20.81■□□□□ 0.92
CDK11A-209ENST00000460465 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
CDK11A-209ENST00000460465 ZKSCAN1P17029 563 aaPredicted RBP20.8■□□□□ 0.92
CDK11A-209ENST00000460465 ANKRD2Q9GZV1 360 aa20.8■□□□□ 0.92
CDK11A-209ENST00000460465 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
CDK11A-209ENST00000460465 PNPLA7Q6ZV29 1317 aa20.8■□□□□ 0.92
CDK11A-209ENST00000460465 WASHC4Q2M389 1173 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 ADCK5Q3MIX3 580 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
CDK11A-209ENST00000460465 MYH13Q9UKX3 1938 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 GYG1P46976 350 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 MCM2P49736 904 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 CRY2Q49AN0 593 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 ZSCAN25Q6NSZ9 544 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 NLGN1Q8N2Q7 840 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 APPBP2Q92624 585 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 JAKMIP1Q96N16 626 aaKnown RBP20.79■□□□□ 0.92
CDK11A-209ENST00000460465 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-209ENST00000460465 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
CDK11A-209ENST00000460465 IDH1O75874 414 aaKnown RBP20.78■□□□□ 0.92
CDK11A-209ENST00000460465 CASTP20810 708 aaKnown RBP20.78■□□□□ 0.92
CDK11A-209ENST00000460465 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
CDK11A-209ENST00000460465 VPS53Q5VIR6 699 aa20.78■□□□□ 0.92
CDK11A-209ENST00000460465 ADD2P35612 726 aa20.78■□□□□ 0.92
CDK11A-209ENST00000460465 DDIT3P35638 169 aa20.78■□□□□ 0.92
CDK11A-209ENST00000460465 IL27Q8NEV9 243 aa20.78■□□□□ 0.92
CDK11A-209ENST00000460465 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
CDK11A-209ENST00000460465 NBR1Q14596 966 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 DSCC1Q9BVC3 393 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 TM6SF1Q9BZW5 370 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 SLC9C2Q5TAH2 1124 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 TTC14Q96N46 770 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 CAMKK2Q96RR4 588 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 CHMP5Q9NZZ3 219 aa20.77■□□□□ 0.92
CDK11A-209ENST00000460465 RPAP1Q9BWH6 1393 aaPredicted RBP20.77■□□□□ 0.92
CDK11A-209ENST00000460465 CPA1P15085 419 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 CAVIN4Q5BKX8 364 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 NOL8Q76FK4 1167 aaKnown RBP20.76■□□□□ 0.91
CDK11A-209ENST00000460465 PUS7LQ9H0K6 701 aaKnown RBP20.76■□□□□ 0.91
CDK11A-209ENST00000460465 IQSEC3Q9UPP2 1182 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-209ENST00000460465 TAF6LQ9Y6J9 622 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 QSER1Q2KHR3 1735 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 HSPD1P10809 573 aaKnown RBP20.76■□□□□ 0.91
CDK11A-209ENST00000460465 KLRK1P26718 216 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 ZSWIM6Q9HCJ5 1215 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 GNL3LQ9NVN8 582 aaKnown RBP20.76■□□□□ 0.91
CDK11A-209ENST00000460465 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
CDK11A-209ENST00000460465 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
CDK11A-209ENST00000460465 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
CDK11A-209ENST00000460465 FAM84BQ96KN1 310 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-209ENST00000460465 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-209ENST00000460465 COL1A1P02452 1464 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-209ENST00000460465 LAMA4Q16363 1823 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms