RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GEMIN8Q9NWZ8 242 aaKnown RBP12.46□□□□□ -0.41
HERC4-207ENST00000460168 COL24A1Q17RW2 1714 aa12.46□□□□□ -0.41
HERC4-207ENST00000460168 IGHMBP2P38935 993 aaKnown RBP12.46□□□□□ -0.42
HERC4-207ENST00000460168 GORABQ5T7V8 394 aa12.46□□□□□ -0.42
HERC4-207ENST00000460168 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.42
HERC4-207ENST00000460168 CARMIL3Q8ND23 1372 aa12.46□□□□□ -0.42
HERC4-207ENST00000460168 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
HERC4-207ENST00000460168 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
HERC4-207ENST00000460168 FSD1Q9BTV5 496 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
HERC4-207ENST00000460168 LRP5O75197 1615 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 BECN1Q14457 450 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 NFIXQ14938 502 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 XAGE2Q96GT9 111 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 CWC22Q9HCG8 908 aaKnown RBP12.44□□□□□ -0.42
HERC4-207ENST00000460168 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
HERC4-207ENST00000460168 PDE8BO95263 885 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
HERC4-207ENST00000460168 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 RUFY2Q8WXA3 655 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 SH3BP1Q9Y3L3 701 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 HIP1O00291 1037 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 GYS1P13807 737 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
HERC4-207ENST00000460168 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
HERC4-207ENST00000460168 HAUS7Q99871 368 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 TNS1Q9HBL0 1735 aaKnown RBP12.43□□□□□ -0.42
HERC4-207ENST00000460168 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
HERC4-207ENST00000460168 IFIT1P09914 478 aaKnown RBP12.42□□□□□ -0.42
HERC4-207ENST00000460168 ADORA1P30542 326 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
HERC4-207ENST00000460168 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 SGSM2O43147 1006 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
HERC4-207ENST00000460168 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
HERC4-207ENST00000460168 IL25Q9H293 177 aa12.42□□□□□ -0.42
HERC4-207ENST00000460168 TERF1P54274 439 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
HERC4-207ENST00000460168 NBPF11Q86T75 865 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 GOLIM4O00461 696 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 TAF5LO75529 589 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 LPIN2Q92539 896 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
HERC4-207ENST00000460168 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
HERC4-207ENST00000460168 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
HERC4-207ENST00000460168 KIF2CQ99661 725 aa12.4□□□□□ -0.42
HERC4-207ENST00000460168 TAF1P21675 1872 aa12.4□□□□□ -0.43
HERC4-207ENST00000460168 SLC5A1P13866 664 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 CHRNDQ07001 517 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC4-207ENST00000460168 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 FAM227BQ96M60 508 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
HERC4-207ENST00000460168 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 TTC36A6NLP5 189 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 ST5P78524 1137 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 NMIQ13287 307 aaPredicted RBP12.39□□□□□ -0.43
HERC4-207ENST00000460168 NFKBIBQ15653 356 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
HERC4-207ENST00000460168 TBC1D2Q9BYX2 928 aa12.39□□□□□ -0.43
HERC4-207ENST00000460168 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
HERC4-207ENST00000460168 COL4A1P02462 1669 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
HERC4-207ENST00000460168 SERPINB2P05120 415 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 RFX7Q2KHR2 1363 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 RAD50Q92878 1312 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 A0A0D9SFI3 127 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 SNAP23O00161 211 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 FGFR2P21802 821 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 TM4SF1P30408 202 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
HERC4-207ENST00000460168 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
HERC4-207ENST00000460168 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
HERC4-207ENST00000460168 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
HERC4-207ENST00000460168 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
HERC4-207ENST00000460168 RABEP1Q15276 862 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms