RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 HELBQ8NG08 1087 aaPredicted RBP29.84■■■□□ 2.37
HOXB3-202ENST00000460160 COA1Q9GZY4 146 aa29.84■■■□□ 2.37
HOXB3-202ENST00000460160 USP17L3A6NCW0 530 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 USP17L4A6NCW7 530 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 SNAP23O00161 211 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 TRAF5O00463 557 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 KCNJ4P48050 445 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 TBC1D10BQ4KMP7 808 aaPredicted RBP29.83■■■□□ 2.37
HOXB3-202ENST00000460160 LDHAL6AQ6ZMR3 332 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 USP17L1Q7RTZ2 530 aa29.83■■■□□ 2.37
HOXB3-202ENST00000460160 AGBL3Q8NEM8 1001 aa29.82■■■□□ 2.36
HOXB3-202ENST00000460160 IRS2Q9Y4H2 1338 aa29.82■■■□□ 2.36
HOXB3-202ENST00000460160 GMLQ99445 158 aa29.81■■■□□ 2.36
HOXB3-202ENST00000460160 CNNM1Q9NRU3 951 aa29.81■■■□□ 2.36
HOXB3-202ENST00000460160 MKRN1Q9UHC7 482 aaKnown RBP29.81■■■□□ 2.36
HOXB3-202ENST00000460160 CNTNAP1P78357 1384 aa29.8■■■□□ 2.36
HOXB3-202ENST00000460160 GLIS2Q9BZE0 524 aaPredicted RBP29.8■■■□□ 2.36
HOXB3-202ENST00000460160 API5Q9BZZ5 524 aaKnown RBP29.8■■■□□ 2.36
HOXB3-202ENST00000460160 ZNF280AP59817 542 aaPredicted RBP29.79■■■□□ 2.36
HOXB3-202ENST00000460160 C15orf52Q6ZUT6 534 aaKnown RBP29.79■■■□□ 2.36
HOXB3-202ENST00000460160 DACT2Q5SW24 774 aa29.78■■■□□ 2.36
HOXB3-202ENST00000460160 RBM26Q5T8P6 1007 aaKnown RBP29.78■■■□□ 2.36
HOXB3-202ENST00000460160 PUS3Q9BZE2 481 aaKnown RBP29.78■■■□□ 2.36
HOXB3-202ENST00000460160 KIF4BQ2VIQ3 1234 aa29.77■■■□□ 2.36
HOXB3-202ENST00000460160 KIF16BQ96L93 1317 aa29.77■■■□□ 2.36
HOXB3-202ENST00000460160 STRIP1Q5VSL9 837 aa29.76■■■□□ 2.36
HOXB3-202ENST00000460160 CST9Q5W186 159 aa29.76■■■□□ 2.36
HOXB3-202ENST00000460160 MXD3Q9BW11 206 aa29.76■■■□□ 2.36
HOXB3-202ENST00000460160 PLIN1O60240 522 aa29.76■■■□□ 2.35
HOXB3-202ENST00000460160 USP17L8P0C7I0 530 aa29.75■■■□□ 2.35
HOXB3-202ENST00000460160 CDC37L1Q7L3B6 337 aa29.75■■■□□ 2.35
HOXB3-202ENST00000460160 ARHGAP45Q92619 1136 aa29.75■■■□□ 2.35
HOXB3-202ENST00000460160 CD209Q9NNX6 404 aa29.75■■■□□ 2.35
HOXB3-202ENST00000460160 RIPOR2Q9Y4F9 1068 aa29.75■■■□□ 2.35
HOXB3-202ENST00000460160 FBXW7Q969H0 707 aa29.74■■■□□ 2.35
HOXB3-202ENST00000460160 RASSF10A6NK89 507 aa29.73■■■□□ 2.35
HOXB3-202ENST00000460160 TTLL5Q6EMB2 1281 aa29.73■■■□□ 2.35
HOXB3-202ENST00000460160 USP48Q86UV5 1035 aa29.72■■■□□ 2.35
HOXB3-202ENST00000460160 ABT1Q9ULW3 272 aaKnown RBP29.72■■■□□ 2.35
HOXB3-202ENST00000460160 MYO3BQ8WXR4 1341 aa29.72■■■□□ 2.35
HOXB3-202ENST00000460160 MYOZ2Q9NPC6 264 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 ASTN2O75129 1339 aaPredicted RBP29.71■■■□□ 2.35
HOXB3-202ENST00000460160 BCAR3O75815 825 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 CELF2O95319 508 aaKnown RBP29.71■■■□□ 2.35
HOXB3-202ENST00000460160 UBTFL1P0CB47 393 aaPredicted RBP29.71■■■□□ 2.35
HOXB3-202ENST00000460160 VEGFBP49765 207 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 GTF2IP78347 998 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 LRRC24Q50LG9 513 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 ZNF804AQ7Z570 1209 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 KLHDC4Q8TBB5 520 aa29.71■■■□□ 2.35
HOXB3-202ENST00000460160 MROH5Q6ZUA9 1318 aa29.7■■■□□ 2.35
HOXB3-202ENST00000460160 UBE4AQ14139 1066 aa29.7■■■□□ 2.34
HOXB3-202ENST00000460160 DLK2Q6UY11 383 aa29.7■■■□□ 2.34
HOXB3-202ENST00000460160 KRT26Q7Z3Y9 468 aa29.7■■■□□ 2.34
HOXB3-202ENST00000460160 GGA3Q9NZ52 723 aa29.7■■■□□ 2.34
HOXB3-202ENST00000460160 IL1R1P14778 569 aa29.69■■■□□ 2.34
HOXB3-202ENST00000460160 DEFB115Q30KQ5 88 aa29.69■■■□□ 2.34
HOXB3-202ENST00000460160 DCPSQ96C86 337 aaKnown RBP29.69■■■□□ 2.34
HOXB3-202ENST00000460160 ZBED9Q6R2W3 1325 aa29.69■■■□□ 2.34
HOXB3-202ENST00000460160 SCARF1Q14162 830 aa29.68■■■□□ 2.34
HOXB3-202ENST00000460160 INTS3Q68E01 1043 aaKnown RBP29.68■■■□□ 2.34
HOXB3-202ENST00000460160 RFX5P48382 616 aaPredicted RBP29.67■■■□□ 2.34
HOXB3-202ENST00000460160 TLL2Q9Y6L7 1015 aa29.67■■■□□ 2.34
HOXB3-202ENST00000460160 ADM5C9JUS6 153 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 TRIM27P14373 513 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 VGLL2Q8N8G2 317 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 MEIS3Q99687 375 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 ZNF408Q9H9D4 720 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 IPO8O15397 1037 aaKnown RBP29.66■■■□□ 2.34
HOXB3-202ENST00000460160 OGFOD1Q8N543 542 aa29.66■■■□□ 2.34
HOXB3-202ENST00000460160 METTL24Q5JXM2 366 aa29.65■■■□□ 2.34
HOXB3-202ENST00000460160 ANGEL2Q5VTE6 544 aaKnown RBP29.65■■■□□ 2.34
HOXB3-202ENST00000460160 ATF7IPQ6VMQ6 1270 aa29.65■■■□□ 2.34
HOXB3-202ENST00000460160 FRAT1Q92837 279 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-202ENST00000460160 TNNQ9UQP3 1299 aa29.65■■■□□ 2.34
HOXB3-202ENST00000460160 LRRFIP2Q9Y608 721 aaKnown RBP29.65■■■□□ 2.34
HOXB3-202ENST00000460160 KIAA0825Q8IV33 1275 aa29.64■■■□□ 2.34
HOXB3-202ENST00000460160 CERS5Q8N5B7 392 aa29.64■■■□□ 2.34
HOXB3-202ENST00000460160 HSPA1AP0DMV8 641 aaKnown RBP29.63■■■□□ 2.33
HOXB3-202ENST00000460160 HSPA1BP0DMV9 641 aaKnown RBP29.63■■■□□ 2.33
HOXB3-202ENST00000460160 GYG1P46976 350 aa29.63■■■□□ 2.33
HOXB3-202ENST00000460160 MMP14P50281 582 aa29.63■■■□□ 2.33
HOXB3-202ENST00000460160 PTPN12Q05209 780 aaKnown RBP29.63■■■□□ 2.33
HOXB3-202ENST00000460160 SAPCD2Q86UD0 394 aa29.63■■■□□ 2.33
HOXB3-202ENST00000460160 SULF1Q8IWU6 871 aa29.63■■■□□ 2.33
HOXB3-202ENST00000460160 FAM84BQ96KN1 310 aaPredicted RBP29.63■■■□□ 2.33
HOXB3-202ENST00000460160 NBPF9Q3BBW0 867 aa29.62■■■□□ 2.33
HOXB3-202ENST00000460160 PITPNM2Q9BZ72 1349 aa29.61■■■□□ 2.33
HOXB3-202ENST00000460160 WDR33Q9C0J8 1336 aaKnown RBP29.61■■■□□ 2.33
HOXB3-202ENST00000460160 PDE8BO95263 885 aa29.61■■■□□ 2.33
HOXB3-202ENST00000460160 HIBADHP31937 336 aaKnown RBP29.61■■■□□ 2.33
HOXB3-202ENST00000460160 HDAC5Q9UQL6 1122 aa29.61■■■□□ 2.33
HOXB3-202ENST00000460160 EYA2O00167 538 aa29.61■■■□□ 2.33
HOXB3-202ENST00000460160 TDRD7Q8NHU6 1098 aaKnown RBP29.61■■■□□ 2.33
HOXB3-202ENST00000460160 JAG2Q9Y219 1238 aa29.61■■■□□ 2.33
HOXB3-202ENST00000460160 WNT10BO00744 389 aa29.6■■■□□ 2.33
HOXB3-202ENST00000460160 SASH1O94885 1247 aa29.6■■■□□ 2.33
HOXB3-202ENST00000460160 HDAC9Q9UKV0 1011 aa29.6■■■□□ 2.33
HOXB3-202ENST00000460160 THSD7BQ9C0I4 1608 aa29.59■■■□□ 2.33
HOXB3-202ENST00000460160 FKBP1AP62942 108 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms