RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 MTMR10Q9NXD2 777 aa17.96■□□□□ 0.47
PCOLCE-202ENST00000460002 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
PCOLCE-202ENST00000460002 STAP2Q9UGK3 403 aa17.96■□□□□ 0.47
PCOLCE-202ENST00000460002 SASH1O94885 1247 aa17.95■□□□□ 0.46
PCOLCE-202ENST00000460002 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
PCOLCE-202ENST00000460002 MAP3K11Q16584 847 aa17.95■□□□□ 0.46
PCOLCE-202ENST00000460002 PSME4Q14997 1843 aa17.95■□□□□ 0.46
PCOLCE-202ENST00000460002 ERBB4Q15303 1308 aa17.95■□□□□ 0.46
PCOLCE-202ENST00000460002 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 USP17L3A6NCW0 530 aa17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 USP17L4A6NCW7 530 aa17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 PDIA6Q15084 440 aa17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 USP17L1Q7RTZ2 530 aa17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
PCOLCE-202ENST00000460002 SPTBN5Q9NRC6 3674 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-202ENST00000460002 SSC5DA1L4H1 1573 aa17.93■□□□□ 0.46
PCOLCE-202ENST00000460002 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-202ENST00000460002 ARHGAP39Q9C0H5 1083 aa17.93■□□□□ 0.46
PCOLCE-202ENST00000460002 ANXA1P04083 346 aa17.92■□□□□ 0.46
PCOLCE-202ENST00000460002 PROSER3Q2NL68 480 aa17.92■□□□□ 0.46
PCOLCE-202ENST00000460002 HSP90AB3PQ58FF7 597 aa17.92■□□□□ 0.46
PCOLCE-202ENST00000460002 APOBEC3FQ8IUX4 373 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-202ENST00000460002 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
PCOLCE-202ENST00000460002 GJA8P48165 433 aa17.91■□□□□ 0.46
PCOLCE-202ENST00000460002 RPS8P62241 208 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-202ENST00000460002 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-202ENST00000460002 ZNF646O15015 1829 aaPredicted RBP17.91■□□□□ 0.46
PCOLCE-202ENST00000460002 OGFOD1Q8N543 542 aa17.9■□□□□ 0.46
PCOLCE-202ENST00000460002 NKX2-3Q8TAU0 364 aa17.9■□□□□ 0.46
PCOLCE-202ENST00000460002 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
PCOLCE-202ENST00000460002 ZSWIM8A7E2V4 1837 aa17.9■□□□□ 0.46
PCOLCE-202ENST00000460002 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
PCOLCE-202ENST00000460002 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
PCOLCE-202ENST00000460002 DEFB129Q9H1M3 183 aa17.89■□□□□ 0.45
PCOLCE-202ENST00000460002 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 MS4A4AQ96JQ5 239 aa17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
PCOLCE-202ENST00000460002 UNCXA6NJT0 531 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 PPP1R12BO60237 982 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 EVI5O60447 810 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 GJB1P08034 283 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 COL9A1P20849 921 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 COPS6Q7L5N1 327 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 BRI3BPQ8WY22 251 aa17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 COL1A1P02452 1464 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-202ENST00000460002 FARP2O94887 1054 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-202ENST00000460002 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-202ENST00000460002 AIMP1Q12904 312 aaKnown RBP17.86■□□□□ 0.45
PCOLCE-202ENST00000460002 GDF15Q99988 308 aa17.86■□□□□ 0.45
PCOLCE-202ENST00000460002 SEC31BQ9NQW1 1179 aa17.86■□□□□ 0.45
PCOLCE-202ENST00000460002 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
PCOLCE-202ENST00000460002 CCL5P13501 91 aa17.85■□□□□ 0.45
PCOLCE-202ENST00000460002 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
PCOLCE-202ENST00000460002 BMP8BP34820 402 aa17.85■□□□□ 0.45
PCOLCE-202ENST00000460002 XAGE3Q8WTP9 111 aa17.85■□□□□ 0.45
PCOLCE-202ENST00000460002 BCAMP50895 628 aa17.84■□□□□ 0.45
PCOLCE-202ENST00000460002 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
PCOLCE-202ENST00000460002 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
PCOLCE-202ENST00000460002 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
PCOLCE-202ENST00000460002 MYO3BQ8WXR4 1341 aa17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 USP2O75604 605 aaPredicted RBP17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 PRMT2P55345 433 aa17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 FBXW7Q969H0 707 aa17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 RNF208Q9H0X6 261 aa17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 ELP3Q9H9T3 547 aa17.83■□□□□ 0.44
PCOLCE-202ENST00000460002 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 GNRH1P01148 92 aa17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 KIF22Q14807 665 aa17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 ANKRD13AQ8IZ07 590 aa17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 U2AF1L4Q8WU68 220 aaKnown RBP17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
PCOLCE-202ENST00000460002 XDHP47989 1333 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 RPTORQ8N122 1335 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 CCL15-CCL14A0A0B4J2E2 113 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 TLR2O60603 784 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 CTGFP29279 349 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 GRK4P32298 578 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 IREB2P48200 963 aaKnown RBP17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 CCL15Q16663 113 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 STRIP1Q5VSL9 837 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
PCOLCE-202ENST00000460002 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 MMP14P50281 582 aa17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 SUPT20HL1Q3ZLR7 823 aa17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
PCOLCE-202ENST00000460002 PPP2R3BQ9Y5P8 575 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms