RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
NEDD9-205ENST00000459670 XDHP47989 1333 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
NEDD9-205ENST00000459670 KCNA3P22001 575 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
NEDD9-205ENST00000459670 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
NEDD9-205ENST00000459670 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
NEDD9-205ENST00000459670 BOLA2Q9H3K6 86 aa12.74□□□□□ -0.37
NEDD9-205ENST00000459670 BBOX1O75936 387 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 SLC5A1P13866 664 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 FBXO33Q7Z6M2 555 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 RPGRQ92834 1020 aaKnown RBP12.73□□□□□ -0.37
NEDD9-205ENST00000459670 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 ANKRD2Q9GZV1 360 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 COL4A5P29400 1685 aa12.73□□□□□ -0.37
NEDD9-205ENST00000459670 ADAMTSL1Q8N6G6 1762 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
NEDD9-205ENST00000459670 GPSM2P81274 684 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
NEDD9-205ENST00000459670 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 SP8Q8IXZ3 490 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 KBTBD3Q8NAB2 608 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
NEDD9-205ENST00000459670 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
NEDD9-205ENST00000459670 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
NEDD9-205ENST00000459670 LAMB1P07942 1786 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
NEDD9-205ENST00000459670 SGSM2O43147 1006 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
NEDD9-205ENST00000459670 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
NEDD9-205ENST00000459670 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
NEDD9-205ENST00000459670 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
NEDD9-205ENST00000459670 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
NEDD9-205ENST00000459670 MYH2Q9UKX2 1941 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 RAD50Q92878 1312 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 NPHP1O15259 732 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
NEDD9-205ENST00000459670 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 CHGBP05060 677 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 CYP2E1P05181 493 aaPredicted RBP12.7□□□□□ -0.38
NEDD9-205ENST00000459670 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 CHRNA5P30532 468 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 ZAP70P43403 619 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
NEDD9-205ENST00000459670 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
NEDD9-205ENST00000459670 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 BCAMP50895 628 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 CCDC158Q5M9N0 1113 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
NEDD9-205ENST00000459670 KIF2CQ99661 725 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 RTFDC1Q9BY42 306 aaPredicted RBP12.69□□□□□ -0.38
NEDD9-205ENST00000459670 BCL11AQ9H165 835 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 SBF1O95248 1867 aa12.69□□□□□ -0.38
NEDD9-205ENST00000459670 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 SEMA3EO15041 775 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 GYG1P46976 350 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 RILPL2Q969X0 211 aa12.68□□□□□ -0.38
NEDD9-205ENST00000459670 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
NEDD9-205ENST00000459670 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
NEDD9-205ENST00000459670 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 H0YIN7 160 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 GOLIM4O00461 696 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 FOXP2O15409 715 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 NMIQ13287 307 aaPredicted RBP12.67□□□□□ -0.38
NEDD9-205ENST00000459670 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 TDRD7Q8NHU6 1098 aaKnown RBP12.67□□□□□ -0.38
NEDD9-205ENST00000459670 FAM227BQ96M60 508 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 DNAJC2Q99543 621 aaKnown RBP12.67□□□□□ -0.38
NEDD9-205ENST00000459670 USP26Q9BXU7 913 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 NAV1Q8NEY1 1877 aa12.67□□□□□ -0.38
NEDD9-205ENST00000459670 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
NEDD9-205ENST00000459670 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-205ENST00000459670 IL1R1P14778 569 aa12.66□□□□□ -0.38
NEDD9-205ENST00000459670 TGFB2P61812 414 aa12.66□□□□□ -0.38
NEDD9-205ENST00000459670 ZNF589Q86UQ0 364 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms