RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 EIF5P55010 431 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 PICALMQ13492 652 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 TICAM2Q86XR7 235 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 METAP2P50579 478 aaKnown RBP eCLIP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 ANAPC15P60006 121 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 DPP8Q6V1X1 898 aaPredicted RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 GBP3Q9H0R5 595 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 SYNMO15061 1565 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 UFL1O94874 794 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 METP08581 1390 aa12.3□□□□□ -0.44
AMBRA1-202ENST00000458649 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 PDE8AO60658 829 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 VAT1LQ9HCJ6 419 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 SNX21Q969T3 373 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 TTC41PQ6P2S7 1318 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 SYCE3A1L190 88 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 SLC9C2Q5TAH2 1124 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 MPNDQ8N594 471 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
AMBRA1-202ENST00000458649 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 IQGAP3Q86VI3 1631 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 TET3O43151 1660 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 KIF1BO60333 1816 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 WDR66Q8TBY9 1149 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 CKAP2LQ8IYA6 745 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 KIF4AO95239 1232 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
AMBRA1-202ENST00000458649 H7C1D1 291 aa12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 UBA7P41226 1012 aa12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 IQCEQ6IPM2 695 aa12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 TBC1D22AQ8WUA7 517 aa12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 NAP1L4Q99733 375 aaKnown RBP12.27□□□□□ -0.44
AMBRA1-202ENST00000458649 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 MCMDC2Q4G0Z9 681 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 LGR6Q9HBX8 967 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 C6orf50Q9HD87 102 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 STX6O43752 255 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 TNFAIP1Q13829 316 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
AMBRA1-202ENST00000458649 KIAA0232Q92628 1395 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 DHX37Q8IY37 1157 aaKnown RBP12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 IVNS1ABPQ9Y6Y0 642 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 CTAGE5O15320 804 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 ZBTB43O43298 467 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 SEC24BO95487 1268 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 GJB2P29033 226 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 PLS1Q14651 629 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 ARHGEF6Q15052 776 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 MICU3Q86XE3 530 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 CNKSR1Q969H4 720 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 PAG1Q9NWQ8 432 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 ABCC3O15438 1527 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 CALML3P27482 149 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 SMAP1Q8IYB5 467 aaPredicted RBP12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
AMBRA1-202ENST00000458649 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 TAF4BQ92750 862 aa12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-202ENST00000458649 PUM3Q15397 648 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms