RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 TSGA10IPQ3SY00 556 aa19.58■□□□□ 0.73
CAPN13-203ENST00000458085 LPIN2Q92539 896 aa19.58■□□□□ 0.73
CAPN13-203ENST00000458085 GBP4Q96PP9 640 aa19.58■□□□□ 0.73
CAPN13-203ENST00000458085 HMG20BQ9P0W2 317 aa19.58■□□□□ 0.73
CAPN13-203ENST00000458085 DTNBO60941 627 aa19.58■□□□□ 0.72
CAPN13-203ENST00000458085 IGHMBP2P38935 993 aaKnown RBP19.58■□□□□ 0.72
CAPN13-203ENST00000458085 IL27Q8NEV9 243 aa19.58■□□□□ 0.72
CAPN13-203ENST00000458085 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
CAPN13-203ENST00000458085 ARAP2Q8WZ64 1704 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 DDX11L8A8MPP1 907 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 BAG4O95429 457 aaKnown RBP19.57■□□□□ 0.72
CAPN13-203ENST00000458085 CLEC17AQ6ZS10 378 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 TICAM2Q86XR7 235 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 CCDC24Q8N4L8 307 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 ZNF512BQ96KM6 892 aaPredicted RBP19.57■□□□□ 0.72
CAPN13-203ENST00000458085 C4BP0C0L5 1744 aa19.57■□□□□ 0.72
CAPN13-203ENST00000458085 ZPR1O75312 459 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 PHF14O94880 888 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 HSPD1P10809 573 aaKnown RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 FOXD4L5Q5VV16 416 aaPredicted RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 FOXD4L4Q8WXT5 416 aaPredicted RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 CHAMP1Q96JM3 812 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 MYH7P12883 1935 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 PSMA5P28066 241 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 ARID4AP29374 1257 aaPredicted RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 BLOC1S2Q6QNY1 142 aa19.56■□□□□ 0.72
CAPN13-203ENST00000458085 BCL11BQ9C0K0 894 aaPredicted RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 PIH1D3Q9NQM4 214 aaKnown RBP19.56■□□□□ 0.72
CAPN13-203ENST00000458085 TRAK2O60296 914 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 RPS6KB1P23443 525 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 CHRNDQ07001 517 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 ST3GAL1Q11201 340 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
CAPN13-203ENST00000458085 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 FAM196AQ6ZSG2 479 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 DSCC1Q9BVC3 393 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 PUS7LQ9H0K6 701 aaKnown RBP19.55■□□□□ 0.72
CAPN13-203ENST00000458085 BRWD3Q6RI45 1802 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 RGL2O15211 777 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 FOXP2O15409 715 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 SLC5A1P13866 664 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 STOX1Q6ZVD7 989 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 C4AP0C0L4 1744 aa19.55■□□□□ 0.72
CAPN13-203ENST00000458085 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
CAPN13-203ENST00000458085 WTIPA6NIX2 430 aaPredicted RBP19.54■□□□□ 0.72
CAPN13-203ENST00000458085 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
CAPN13-203ENST00000458085 ME3Q16798 604 aa19.54■□□□□ 0.72
CAPN13-203ENST00000458085 TPCN1Q9ULQ1 816 aa19.54■□□□□ 0.72
CAPN13-203ENST00000458085 SLC10A5Q5PT55 438 aa19.54■□□□□ 0.72
CAPN13-203ENST00000458085 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
CAPN13-203ENST00000458085 NBPF5PQ86XG9 351 aaPredicted RBP19.53■□□□□ 0.72
CAPN13-203ENST00000458085 CCDC83Q8IWF9 413 aa19.53■□□□□ 0.72
CAPN13-203ENST00000458085 BRD1O95696 1058 aa19.53■□□□□ 0.72
CAPN13-203ENST00000458085 ZFYP08048 801 aaPredicted RBP19.53■□□□□ 0.72
CAPN13-203ENST00000458085 RASGRF1Q13972 1273 aa19.53■□□□□ 0.72
CAPN13-203ENST00000458085 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
CAPN13-203ENST00000458085 APPBP2Q92624 585 aa19.53■□□□□ 0.72
CAPN13-203ENST00000458085 CELF1Q92879 486 aaKnown RBP19.53■□□□□ 0.72
CAPN13-203ENST00000458085 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
CAPN13-203ENST00000458085 UQCRFS1P1P0C7P4 283 aa19.52■□□□□ 0.72
CAPN13-203ENST00000458085 BCAMP50895 628 aa19.52■□□□□ 0.72
CAPN13-203ENST00000458085 NECAB1Q8N987 351 aa19.52■□□□□ 0.72
CAPN13-203ENST00000458085 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
CAPN13-203ENST00000458085 ADD2P35612 726 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 KRT32Q14532 448 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 ANKRD18AQ8IVF6 992 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 GZF1Q9H116 711 aaPredicted RBP19.51■□□□□ 0.71
CAPN13-203ENST00000458085 LAMA4Q16363 1823 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 IDH1O75874 414 aaKnown RBP19.51■□□□□ 0.71
CAPN13-203ENST00000458085 LRRFIP1Q32MZ4 808 aaKnown RBP19.51■□□□□ 0.71
CAPN13-203ENST00000458085 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 MCTP1Q6DN14 999 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 WWC3Q9ULE0 1092 aa19.51■□□□□ 0.71
CAPN13-203ENST00000458085 A0A1B0GUL6 1792 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 TRIM37O94972 964 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 RFC4P35249 363 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 SLC9C2Q5TAH2 1124 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 KRT27Q7Z3Y8 459 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 SPATA5Q8NB90 893 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
CAPN13-203ENST00000458085 ZSCAN31Q96LW9 406 aaPredicted RBP19.5■□□□□ 0.71
CAPN13-203ENST00000458085 GPAA1O43292 621 aa19.49■□□□□ 0.71
CAPN13-203ENST00000458085 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
CAPN13-203ENST00000458085 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
CAPN13-203ENST00000458085 ALDH8A1Q9H2A2 487 aaPredicted RBP19.49■□□□□ 0.71
CAPN13-203ENST00000458085 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
CAPN13-203ENST00000458085 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.71
CAPN13-203ENST00000458085 BSDC1Q9NW68 430 aaPredicted RBP19.49■□□□□ 0.71
CAPN13-203ENST00000458085 MINPP1Q9UNW1 487 aa19.49■□□□□ 0.71
CAPN13-203ENST00000458085 PDE6AP16499 860 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 NLRP3Q96P20 1036 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.48■□□□□ 0.71
CAPN13-203ENST00000458085 ZNF532Q9HCE3 1301 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.48■□□□□ 0.71
CAPN13-203ENST00000458085 TCRBV5S4A2TA0A5A2 114 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 NFIXQ14938 502 aa19.48■□□□□ 0.71
CAPN13-203ENST00000458085 IQSEC3Q9UPP2 1182 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms