RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
DDX39B-213ENST00000456976 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
DDX39B-213ENST00000456976 PRMT2P55345 433 aa15.74■□□□□ 0.11
DDX39B-213ENST00000456976 MAP3K11Q16584 847 aa15.74■□□□□ 0.11
DDX39B-213ENST00000456976 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
DDX39B-213ENST00000456976 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
DDX39B-213ENST00000456976 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
DDX39B-213ENST00000456976 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
DDX39B-213ENST00000456976 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
DDX39B-213ENST00000456976 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
DDX39B-213ENST00000456976 UFL1O94874 794 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 GNRH1P01148 92 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 GJA8P48165 433 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 MMP14P50281 582 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 PTPN18Q99952 460 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 GGA1Q9UJY5 639 aa15.73■□□□□ 0.11
DDX39B-213ENST00000456976 ERBB4Q15303 1308 aa15.72■□□□□ 0.11
DDX39B-213ENST00000456976 COL9A1P20849 921 aa15.72■□□□□ 0.11
DDX39B-213ENST00000456976 RPS8P62241 208 aaKnown RBP15.72■□□□□ 0.11
DDX39B-213ENST00000456976 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
DDX39B-213ENST00000456976 UBE2Q1Q7Z7E8 422 aa15.72■□□□□ 0.11
DDX39B-213ENST00000456976 CLMNQ96JQ2 1002 aa15.72■□□□□ 0.11
DDX39B-213ENST00000456976 GJB1P08034 283 aa15.71■□□□□ 0.11
DDX39B-213ENST00000456976 BMP8BP34820 402 aa15.71■□□□□ 0.11
DDX39B-213ENST00000456976 MTFR1Q15390 333 aa15.71■□□□□ 0.11
DDX39B-213ENST00000456976 TAF1CQ15572 869 aaPredicted RBP15.71■□□□□ 0.11
DDX39B-213ENST00000456976 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
DDX39B-213ENST00000456976 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
DDX39B-213ENST00000456976 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.14e-14■□□□□ 8.9
DDX39B-213ENST00000456976 LRIT3Q3SXY7 679 aa15.7■□□□□ 0.1
DDX39B-213ENST00000456976 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
DDX39B-213ENST00000456976 KDM3BQ7LBC6 1761 aa15.7■□□□□ 0.1
DDX39B-213ENST00000456976 FARP2O94887 1054 aaPredicted RBP15.69■□□□□ 0.1
DDX39B-213ENST00000456976 IREB2P48200 963 aaKnown RBP15.69■□□□□ 0.1
DDX39B-213ENST00000456976 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
DDX39B-213ENST00000456976 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
DDX39B-213ENST00000456976 DEFB129Q9H1M3 183 aa15.69■□□□□ 0.1
DDX39B-213ENST00000456976 SASH1O94885 1247 aa15.68■□□□□ 0.1
DDX39B-213ENST00000456976 THUMPD2Q9BTF0 503 aaKnown RBP15.68■□□□□ 0.1
DDX39B-213ENST00000456976 RNF208Q9H0X6 261 aa15.68■□□□□ 0.1
DDX39B-213ENST00000456976 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
DDX39B-213ENST00000456976 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
DDX39B-213ENST00000456976 VCANP13611 3396 aa15.67■□□□□ 0.1
DDX39B-213ENST00000456976 HOXD10P28358 340 aa15.67■□□□□ 0.1
DDX39B-213ENST00000456976 GJA5P36382 358 aa15.67■□□□□ 0.1
DDX39B-213ENST00000456976 ANKRD13AQ8IZ07 590 aa15.67■□□□□ 0.1
DDX39B-213ENST00000456976 BIN2Q9UBW5 565 aaPredicted RBP15.67■□□□□ 0.1
DDX39B-213ENST00000456976 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
DDX39B-213ENST00000456976 CCL5P13501 91 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 CAPN2P17655 700 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 GRK4P32298 578 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 UBXN2AP68543 259 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 GDF15Q99988 308 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 PPP2R3BQ9Y5P8 575 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 RPTORQ8N122 1335 aa15.66■□□□□ 0.1
DDX39B-213ENST00000456976 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
DDX39B-213ENST00000456976 LACTBP83111 547 aaPredicted RBP15.65■□□□□ 0.1
DDX39B-213ENST00000456976 DACT2Q5SW24 774 aa15.65■□□□□ 0.1
DDX39B-213ENST00000456976 RAET1EQ8TD07 263 aa15.65■□□□□ 0.1
DDX39B-213ENST00000456976 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
DDX39B-213ENST00000456976 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
DDX39B-213ENST00000456976 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
DDX39B-213ENST00000456976 LAMB2P55268 1798 aa15.64■□□□□ 0.1
DDX39B-213ENST00000456976 EIF2S2P20042 333 aaKnown RBP15.64■□□□□ 0.09
DDX39B-213ENST00000456976 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 BCAMP50895 628 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 GTF2A2P52657 109 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
DDX39B-213ENST00000456976 STRIP1Q5VSL9 837 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 COPS6Q7L5N1 327 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 U2AF1L4Q8WU68 220 aaKnown RBP15.64■□□□□ 0.09
DDX39B-213ENST00000456976 OPTNQ96CV9 577 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 MS4A4AQ96JQ5 239 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 SCN9AQ15858 1988 aa15.64■□□□□ 0.09
DDX39B-213ENST00000456976 DLG5Q8TDM6 1919 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 CCL15-CCL14A0A0B4J2E2 113 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 TLR2O60603 784 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 USP2O75604 605 aaPredicted RBP15.63■□□□□ 0.09
DDX39B-213ENST00000456976 CCL15Q16663 113 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 HELBQ8NG08 1087 aaPredicted RBP15.63■□□□□ 0.09
DDX39B-213ENST00000456976 FAM122AQ96E09 287 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 MXD3Q9BW11 206 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 RIPOR2Q9Y4F9 1068 aa15.63■□□□□ 0.09
DDX39B-213ENST00000456976 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
DDX39B-213ENST00000456976 SPTBN5Q9NRC6 3674 aaKnown RBP15.63■□□□□ 0.09
DDX39B-213ENST00000456976 SGPL1O95470 568 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
DDX39B-213ENST00000456976 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 PLA2G5P39877 138 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 PDIA6Q15084 440 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 TDHQ8IZJ6 230 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
DDX39B-213ENST00000456976 ELP3Q9H9T3 547 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms