RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 PLCH1Q4KWH8 1693 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 SLC27A2O14975 620 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 EPB41L2O43491 1005 aaKnown RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 PI16Q6UXB8 463 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 LRRC2Q9BYS8 371 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 ZNF609O15014 1411 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 UBN2Q6ZU65 1347 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 JAK2O60674 1132 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 TAF5LO75529 589 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 FAM98CQ17RN3 349 aaKnown RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
LINC00959-201ENST00000456581 TRMT112Q9UI30 125 aaKnown RBP14.7□□□□□ -0.06
LINC00959-201ENST00000456581 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 JCADQ9P266 1359 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 MED23Q9ULK4 1368 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 PTGS1P23219 599 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 ITPK1Q13572 414 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 A0A0G2JLW4 131 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 CEBPZQ03701 1054 aaKnown RBP14.69□□□□□ -0.06
LINC00959-201ENST00000456581 SCARF1Q14162 830 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 C8orf37Q96NL8 207 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 CEP126Q9P2H0 1117 aa14.69□□□□□ -0.06
LINC00959-201ENST00000456581 SPATA31A5Q5VU36 1347 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 SPATA31A7Q8IWB4 1347 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 INTS5Q6P9B9 1019 aaKnown RBP14.68□□□□□ -0.06
LINC00959-201ENST00000456581 TTLL11Q8NHH1 800 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 HIP1O00291 1037 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 IRS4O14654 1257 aaPredicted RBP14.68□□□□□ -0.06
LINC00959-201ENST00000456581 ITGA6P23229 1130 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
LINC00959-201ENST00000456581 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC00959-201ENST00000456581 IFIT5Q13325 482 aaKnown RBP14.68□□□□□ -0.06
LINC00959-201ENST00000456581 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 DACT1Q9NYF0 836 aa14.68□□□□□ -0.06
LINC00959-201ENST00000456581 LOC102724428A0A0B4J2F2 783 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 SNAP23O00161 211 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 RIOK3O14730 519 aaKnown RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 SIK1P57059 783 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 HSP90AB3PQ58FF7 597 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 CSF1RP07333 972 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 IFIT1P09914 478 aaKnown RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 TOB2Q14106 344 aaPredicted RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 HELBQ8NG08 1087 aaPredicted RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 FTOQ9C0B1 505 aaKnown RBP eCLIP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 MRVI1Q9Y6F6 885 aa14.67□□□□□ -0.06
LINC00959-201ENST00000456581 MYH14Q7Z406 1995 aaKnown RBP14.67□□□□□ -0.06
LINC00959-201ENST00000456581 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 XAGE2Q96GT9 111 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 NUP98P52948 1817 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 ARID5BQ14865 1188 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
LINC00959-201ENST00000456581 KCNB2Q92953 911 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 ATP6V1DQ9Y5K8 247 aa14.66□□□□□ -0.06
LINC00959-201ENST00000456581 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 LDHAL6AQ6ZMR3 332 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 KIAA1524Q8TCG1 905 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 LRP6O75581 1613 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 NR1I2O75469 434 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 CIAO1O76071 339 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 U2AF2P26368 475 aaKnown RBP eCLIP14.65□□□□□ -0.06
LINC00959-201ENST00000456581 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.06
LINC00959-201ENST00000456581 EIF5P55010 431 aaKnown RBP14.65□□□□□ -0.06
LINC00959-201ENST00000456581 CTSWP56202 376 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 TYRO3Q06418 890 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 GORABQ5T7V8 394 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 NGLY1Q96IV0 654 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 SLIT2O94813 1529 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 SUSD4Q5VX71 490 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 BLOC1S2Q6QNY1 142 aa14.65□□□□□ -0.06
LINC00959-201ENST00000456581 NRAPQ86VF7 1730 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 ZSCAN20P17040 1043 aaPredicted RBP14.64□□□□□ -0.07
LINC00959-201ENST00000456581 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 FBXW7Q969H0 707 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 PLA2G12BQ9BX93 195 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC87Q9NVE4 849 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 KRT85P78386 507 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC94Q9BW85 323 aaPredicted RBP14.64□□□□□ -0.07
LINC00959-201ENST00000456581 GPR108Q9NPR9 543 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
LINC00959-201ENST00000456581 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
LINC00959-201ENST00000456581 LETM1O95202 739 aaPredicted RBP14.63□□□□□ -0.07
LINC00959-201ENST00000456581 CYP21A2P08686 494 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 PGBD1Q96JS3 809 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 CBX8Q9HC52 389 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 CNNM1Q9NRU3 951 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 MAP3K11Q16584 847 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms