RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 UBE3CQ15386 1083 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 ZNF827Q17R98 1081 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 KIAA1211Q6ZU35 1233 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
ERCC3-204ENST00000456257 ANKRD2Q9GZV1 360 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 U3KPZ7 1027 aaPredicted RBP9.04□□□□□ -0.96
ERCC3-204ENST00000456257 CCDC171Q6TFL3 1326 aa9.04□□□□□ -0.96
ERCC3-204ENST00000456257 SEMA3EO15041 775 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 CYP2E1P05181 493 aaPredicted RBP9.03□□□□□ -0.96
ERCC3-204ENST00000456257 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
ERCC3-204ENST00000456257 ZAP70P43403 619 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 PHKA1P46020 1223 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 GRAPQ13588 217 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 TTC39AQ5SRH9 613 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 DDX46Q7L014 1031 aaKnown RBP9.03□□□□□ -0.96
ERCC3-204ENST00000456257 CNBD1Q8NA66 436 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 HELBQ8NG08 1087 aaPredicted RBP9.03□□□□□ -0.96
ERCC3-204ENST00000456257 GRAPLQ8TC17 118 aaPredicted RBP9.03□□□□□ -0.96
ERCC3-204ENST00000456257 FSD1Q9BTV5 496 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 DSCC1Q9BVC3 393 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 BRIP1Q9BX63 1249 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 ANO2Q9NQ90 1003 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 HMG20BQ9P0W2 317 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 LEMD3Q9Y2U8 911 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 SNX14Q9Y5W7 946 aa9.03□□□□□ -0.96
ERCC3-204ENST00000456257 C4AP0C0L4 1744 aa9.02□□□□□ -0.96
ERCC3-204ENST00000456257 TCRBV5S4A2TA0A5A2 114 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 GOLIM4O00461 696 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 PHF14O94880 888 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
ERCC3-204ENST00000456257 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 GORABQ5T7V8 394 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 CCDC125Q86Z20 511 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 OSBP2Q969R2 916 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 FAM84BQ96KN1 310 aaPredicted RBP9.02□□□□□ -0.97
ERCC3-204ENST00000456257 TTC14Q96N46 770 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 TFCP2L1Q9NZI6 479 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 PNPLA7Q6ZV29 1317 aa9.02□□□□□ -0.97
ERCC3-204ENST00000456257 COL4A1P02462 1669 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 K7ELQ4 463 aaPredicted RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 ADD2P35612 726 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 CUL4AQ13619 759 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 ALX1Q15699 326 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 SLC15A2Q16348 729 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 CREB3L3Q68CJ9 461 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 ZSCAN25Q6NSZ9 544 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 SPATA5Q8NB90 893 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 APPBP2Q92624 585 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 PIH1D3Q9NQM4 214 aaKnown RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
ERCC3-204ENST00000456257 AKAP11Q9UKA4 1901 aa9.01□□□□□ -0.97
ERCC3-204ENST00000456257 NRXN2Q9P2S2 1712 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 SNAP23O00161 211 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 SLC27A2O14975 620 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 FOXP2O15409 715 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 BCAMP50895 628 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 ST5P78524 1137 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 FKBP4Q02790 459 aaKnown RBP eCLIP9□□□□□ -0.97
ERCC3-204ENST00000456257 RASGRF1Q13972 1273 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 POTEHQ6S545 545 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 HSCBQ8IWL3 235 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 SP8Q8IXZ3 490 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 FBXL16Q8N461 479 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
ERCC3-204ENST00000456257 DDX24Q9GZR7 859 aaKnown RBP eCLIP9□□□□□ -0.97
ERCC3-204ENST00000456257 NDUFB9Q9Y6M9 179 aa9□□□□□ -0.97
ERCC3-204ENST00000456257 TNS1Q9HBL0 1735 aaKnown RBP9□□□□□ -0.97
ERCC3-204ENST00000456257 WTIPA6NIX2 430 aaPredicted RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 ST18O60284 1047 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 CHGBP05060 677 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 SRGNP10124 158 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 HSPD1P10809 573 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 NEK4P51957 841 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 VPS53Q5VIR6 699 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 CLEC17AQ6ZS10 378 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 TDRD7Q8NHU6 1098 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 INTS4Q96HW7 963 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 RBM17Q96I25 401 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 CWC22Q9HCG8 908 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 GNL3LQ9NVN8 582 aaKnown RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 DENND2AQ9ULE3 1009 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 ARAP2Q8WZ64 1704 aa8.99□□□□□ -0.97
ERCC3-204ENST00000456257 RPAP1Q9BWH6 1393 aaPredicted RBP8.99□□□□□ -0.97
ERCC3-204ENST00000456257 NPR1P16066 1061 aa8.98□□□□□ -0.97
ERCC3-204ENST00000456257 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
ERCC3-204ENST00000456257 PSMA5P28066 241 aa8.98□□□□□ -0.97
ERCC3-204ENST00000456257 HIBADHP31937 336 aaKnown RBP8.98□□□□□ -0.97
ERCC3-204ENST00000456257 KRT32Q14532 448 aa8.98□□□□□ -0.97
ERCC3-204ENST00000456257 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms