RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 SHTN1A0MZ66 631 aa25.64■■□□□ 1.7
TNRC18-208ENST00000455076 USP17L3A6NCW0 530 aa25.64■■□□□ 1.7
TNRC18-208ENST00000455076 USP17L4A6NCW7 530 aa25.64■■□□□ 1.7
TNRC18-208ENST00000455076 KLRK1P26718 216 aa25.64■■□□□ 1.7
TNRC18-208ENST00000455076 USP17L1Q7RTZ2 530 aa25.64■■□□□ 1.7
TNRC18-208ENST00000455076 INTS3Q68E01 1043 aaKnown RBP25.63■■□□□ 1.69
TNRC18-208ENST00000455076 JMYQ8N9B5 988 aa25.63■■□□□ 1.69
TNRC18-208ENST00000455076 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
TNRC18-208ENST00000455076 TRPM7Q96QT4 1865 aa25.62■■□□□ 1.69
TNRC18-208ENST00000455076 KCNJ4P48050 445 aa25.62■■□□□ 1.69
TNRC18-208ENST00000455076 ZNF280AP59817 542 aaPredicted RBP25.62■■□□□ 1.69
TNRC18-208ENST00000455076 STRIP1Q5VSL9 837 aa25.62■■□□□ 1.69
TNRC18-208ENST00000455076 RIPOR2Q9Y4F9 1068 aa25.62■■□□□ 1.69
TNRC18-208ENST00000455076 TMEM88BA6NKF7 163 aa25.61■■□□□ 1.69
TNRC18-208ENST00000455076 IPO8O15397 1037 aaKnown RBP25.61■■□□□ 1.69
TNRC18-208ENST00000455076 TAF5LO75529 589 aa25.61■■□□□ 1.69
TNRC18-208ENST00000455076 DACT2Q5SW24 774 aa25.61■■□□□ 1.69
TNRC18-208ENST00000455076 MYO3BQ8WXR4 1341 aa25.61■■□□□ 1.69
TNRC18-208ENST00000455076 HELBQ8NG08 1087 aaPredicted RBP25.6■■□□□ 1.69
TNRC18-208ENST00000455076 MROH5Q6ZUA9 1318 aa25.6■■□□□ 1.69
TNRC18-208ENST00000455076 SNAP23O00161 211 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 BCAR3O75815 825 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 UBTFL1P0CB47 393 aaPredicted RBP25.59■■□□□ 1.69
TNRC18-208ENST00000455076 TRIM27P14373 513 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 UBE4AQ14139 1066 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 ATF7IPQ6VMQ6 1270 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 SAMD7Q7Z3H4 446 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 PUS3Q9BZE2 481 aaKnown RBP25.59■■□□□ 1.69
TNRC18-208ENST00000455076 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
TNRC18-208ENST00000455076 EGFRP00533 1210 aa25.58■■□□□ 1.69
TNRC18-208ENST00000455076 RFX5P48382 616 aaPredicted RBP25.58■■□□□ 1.69
TNRC18-208ENST00000455076 MMP14P50281 582 aa25.58■■□□□ 1.69
TNRC18-208ENST00000455076 CD209Q9NNX6 404 aa25.58■■□□□ 1.69
TNRC18-208ENST00000455076 IL1R1P14778 569 aa25.57■■□□□ 1.68
TNRC18-208ENST00000455076 CNTNAP1P78357 1384 aa25.56■■□□□ 1.68
TNRC18-208ENST00000455076 KIF4BQ2VIQ3 1234 aa25.56■■□□□ 1.68
TNRC18-208ENST00000455076 TBC1D10BQ4KMP7 808 aaPredicted RBP25.56■■□□□ 1.68
TNRC18-208ENST00000455076 ZNF804AQ7Z570 1209 aa25.56■■□□□ 1.68
TNRC18-208ENST00000455076 VGLL2Q8N8G2 317 aa25.56■■□□□ 1.68
TNRC18-208ENST00000455076 USP17L8P0C7I0 530 aa25.55■■□□□ 1.68
TNRC18-208ENST00000455076 CDC37L1Q7L3B6 337 aa25.55■■□□□ 1.68
TNRC18-208ENST00000455076 MEIS3Q99687 375 aa25.55■■□□□ 1.68
TNRC18-208ENST00000455076 FBXO3Q9UK99 471 aa25.55■■□□□ 1.68
TNRC18-208ENST00000455076 LRRC24Q50LG9 513 aa25.54■■□□□ 1.68
TNRC18-208ENST00000455076 RASSF10A6NK89 507 aa25.53■■□□□ 1.68
TNRC18-208ENST00000455076 TRAF5O00463 557 aa25.53■■□□□ 1.68
TNRC18-208ENST00000455076 PTPN12Q05209 780 aaKnown RBP25.53■■□□□ 1.68
TNRC18-208ENST00000455076 TTLL5Q6EMB2 1281 aa25.53■■□□□ 1.68
TNRC18-208ENST00000455076 GLIS2Q9BZE0 524 aaPredicted RBP25.53■■□□□ 1.68
TNRC18-208ENST00000455076 GNAI3P08754 354 aa25.52■■□□□ 1.68
TNRC18-208ENST00000455076 FKBP1AP62942 108 aaKnown RBP25.52■■□□□ 1.68
TNRC18-208ENST00000455076 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
TNRC18-208ENST00000455076 MYOZ2Q9NPC6 264 aa25.52■■□□□ 1.68
TNRC18-208ENST00000455076 LRRFIP2Q9Y608 721 aaKnown RBP25.52■■□□□ 1.68
TNRC18-208ENST00000455076 EYA2O00167 538 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 PLIN1O60240 522 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 PDE8BO95263 885 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 MTX1Q13505 466 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 CST9Q5W186 159 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 KLHDC4Q8TBB5 520 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
TNRC18-208ENST00000455076 ARAP2Q8WZ64 1704 aa25.51■■□□□ 1.67
TNRC18-208ENST00000455076 POLR2AP24928 1970 aaKnown RBP25.51■■□□□ 1.67
TNRC18-208ENST00000455076 GTF2IP78347 998 aa25.5■■□□□ 1.67
TNRC18-208ENST00000455076 FMR1Q06787 632 aaKnown RBP eCLIP25.5■■□□□ 1.672e-7■■■□□ 14.9
TNRC18-208ENST00000455076 METTL24Q5JXM2 366 aa25.5■■□□□ 1.67
TNRC18-208ENST00000455076 MXD3Q9BW11 206 aa25.5■■□□□ 1.67
TNRC18-208ENST00000455076 PITPNM2Q9BZ72 1349 aa25.5■■□□□ 1.67
TNRC18-208ENST00000455076 TNNQ9UQP3 1299 aa25.5■■□□□ 1.67
TNRC18-208ENST00000455076 FAM205AQ6ZU69 1335 aa25.49■■□□□ 1.67
TNRC18-208ENST00000455076 CIAO1O76071 339 aa25.49■■□□□ 1.67
TNRC18-208ENST00000455076 TDRD7Q8NHU6 1098 aaKnown RBP25.49■■□□□ 1.67
TNRC18-208ENST00000455076 FAM84BQ96KN1 310 aaPredicted RBP25.49■■□□□ 1.67
TNRC18-208ENST00000455076 THSD7BQ9C0I4 1608 aa25.48■■□□□ 1.67
TNRC18-208ENST00000455076 FGFR2P21802 821 aa25.48■■□□□ 1.67
TNRC18-208ENST00000455076 RBM26Q5T8P6 1007 aaKnown RBP25.48■■□□□ 1.67
TNRC18-208ENST00000455076 ATG9AQ7Z3C6 839 aa25.48■■□□□ 1.67
TNRC18-208ENST00000455076 OGFOD1Q8N543 542 aa25.48■■□□□ 1.67
TNRC18-208ENST00000455076 DCPSQ96C86 337 aaKnown RBP25.48■■□□□ 1.67
TNRC18-208ENST00000455076 GGA3Q9NZ52 723 aa25.48■■□□□ 1.67
TNRC18-208ENST00000455076 MKRN1Q9UHC7 482 aaKnown RBP25.48■■□□□ 1.67
TNRC18-208ENST00000455076 SASH1O94885 1247 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 HIBADHP31937 336 aaKnown RBP25.47■■□□□ 1.67
TNRC18-208ENST00000455076 KRT26Q7Z3Y9 468 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 FBXO33Q7Z6M2 555 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 CERS5Q8N5B7 392 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 FBXW7Q969H0 707 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 COPRSQ9NQ92 184 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 TLL2Q9Y6L7 1015 aa25.47■■□□□ 1.67
TNRC18-208ENST00000455076 SCARF1Q14162 830 aa25.46■■□□□ 1.67
TNRC18-208ENST00000455076 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
TNRC18-208ENST00000455076 ZBED3Q96IU2 234 aaPredicted RBP25.46■■□□□ 1.67
TNRC18-208ENST00000455076 ASTN2O75129 1339 aaPredicted RBP25.45■■□□□ 1.66
TNRC18-208ENST00000455076 CELF2O95319 508 aaKnown RBP25.45■■□□□ 1.66
TNRC18-208ENST00000455076 GYG1P46976 350 aa25.45■■□□□ 1.66
TNRC18-208ENST00000455076 USP48Q86UV5 1035 aa25.45■■□□□ 1.66
TNRC18-208ENST00000455076 TMEM57Q8N5G2 664 aa25.45■■□□□ 1.66
TNRC18-208ENST00000455076 CLUAP1Q96AJ1 413 aa25.45■■□□□ 1.66
TNRC18-208ENST00000455076 HHIPL1Q96JK4 782 aa25.45■■□□□ 1.66
TNRC18-208ENST00000455076 HDAC9Q9UKV0 1011 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms