RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 CHMP4AQ9BY43 222 aa7.61□□□□□ -1.19
MDH1-208ENST00000454035 TRIM34Q9BYJ4 488 aa7.61□□□□□ -1.19
MDH1-208ENST00000454035 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
MDH1-208ENST00000454035 ZNF652Q9Y2D9 606 aa7.61□□□□□ -1.19
MDH1-208ENST00000454035 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
MDH1-208ENST00000454035 NRXN2Q9P2S2 1712 aa7.61□□□□□ -1.19
MDH1-208ENST00000454035 SCN7AQ01118 1682 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 ADCY9O60503 1353 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 CARMIL3Q8ND23 1372 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 KIF13BQ9NQT8 1826 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.6□□□□□ -1.19
MDH1-208ENST00000454035 A0A0G2JLW4 131 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 ELL2O00472 640 aaPredicted RBP7.6□□□□□ -1.19
MDH1-208ENST00000454035 GPR37L1O60883 481 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 SLC10A3P09131 477 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 VAC14Q08AM6 782 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 WASHC4Q2M389 1173 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 TMCO4Q5TGY1 634 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 PRR5LQ6MZQ0 368 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 KIF6Q6ZMV9 814 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 BICDL1Q6ZP65 573 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 COPS6Q7L5N1 327 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 ZNF34Q8IZ26 560 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 LRRN4Q8WUT4 740 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 TSC1Q92574 1164 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 HYPKQ9NX55 129 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 DBF4Q9UBU7 674 aaPredicted RBP7.6□□□□□ -1.19
MDH1-208ENST00000454035 PXDNLA1KZ92 1463 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 CCDC88AQ3V6T2 1871 aa7.6□□□□□ -1.19
MDH1-208ENST00000454035 BCORQ6W2J9 1755 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 DPEP1P16444 411 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 PDE4CQ08493 712 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 CCDC30Q5VVM6 783 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 BRIP1Q9BX63 1249 aa7.59□□□□□ -1.19
MDH1-208ENST00000454035 NIP7Q9Y221 180 aaKnown RBP eCLIP7.59□□□□□ -1.19
MDH1-208ENST00000454035 KIAA1551Q9HCM1 1747 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 BRCA1P38398 1863 aaKnown RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 AFDNP55196 1824 aaKnown RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 KLRG2A4D1S0 409 aaPredicted RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 VAMP4O75379 141 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 AIMP1Q12904 312 aaKnown RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 TCIRG1Q13488 830 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 MTMR2Q13614 643 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 TWISTNBQ3B726 338 aaPredicted RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
MDH1-208ENST00000454035 CNBD1Q8NA66 436 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 MYH16Q9H6N6 1097 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 PDZRN3Q9UPQ7 1066 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 SBF1O95248 1867 aa7.58□□□□□ -1.2
MDH1-208ENST00000454035 UBN2Q6ZU65 1347 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 CFAP99D6REC4 459 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 CHRNA5P30532 468 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 PDE6BP35913 854 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 HTRA3P83110 453 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 EXOSC9Q06265 439 aaKnown RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 HSP90AB3PQ58FF7 597 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 TRMT2AQ8IZ69 625 aaKnown RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 RGS22Q8NE09 1264 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 HELBQ8NG08 1087 aaPredicted RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 PLBD2Q8NHP8 589 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 NYXQ9GZU5 481 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 IBTKQ9P2D0 1353 aaPredicted RBP7.57□□□□□ -1.2
MDH1-208ENST00000454035 NUP98P52948 1817 aa7.57□□□□□ -1.2
MDH1-208ENST00000454035 PCNTO95613 3336 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 E9PSI1 815 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 H0YIN7 160 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 NTSR2O95665 410 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 GPTP24298 496 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 APLP1P51693 650 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 ST5P78524 1137 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 SLFN5Q08AF3 891 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 SLC10A5Q5PT55 438 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 COL13A1Q5TAT6 717 aaPredicted RBP7.56□□□□□ -1.2
MDH1-208ENST00000454035 SUSD4Q5VX71 490 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 NLRP10Q86W26 655 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 C2CD5Q86YS7 1000 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 CCDC24Q8N4L8 307 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 ISCA1Q9BUE6 129 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 ALG2Q9H553 416 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 ARFGEF1Q9Y6D6 1849 aa7.56□□□□□ -1.2
MDH1-208ENST00000454035 C6orf229H3BNL8 230 aa7.55□□□□□ -1.2
MDH1-208ENST00000454035 SRGNP10124 158 aa7.55□□□□□ -1.2
MDH1-208ENST00000454035 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
MDH1-208ENST00000454035 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
MDH1-208ENST00000454035 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms