RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 RNF113AO15541 343 aaKnown RBP25.69■■□□□ 1.7
CTU2-202ENST00000453996 PI16Q6UXB8 463 aa25.69■■□□□ 1.7
CTU2-202ENST00000453996 COL23A1Q86Y22 540 aaPredicted RBP25.69■■□□□ 1.7
CTU2-202ENST00000453996 MAP4K1Q92918 833 aa25.69■■□□□ 1.7
CTU2-202ENST00000453996 POLRMTO00411 1230 aaKnown RBP25.68■■□□□ 1.7
CTU2-202ENST00000453996 DDR1Q08345 913 aa25.68■■□□□ 1.7
CTU2-202ENST00000453996 CHGBP05060 677 aa25.67■■□□□ 1.7
CTU2-202ENST00000453996 ZFYP08048 801 aaPredicted RBP25.67■■□□□ 1.7
CTU2-202ENST00000453996 UBE4AQ14139 1066 aa25.67■■□□□ 1.7
CTU2-202ENST00000453996 TTF1Q15361 905 aaPredicted RBP25.67■■□□□ 1.7
CTU2-202ENST00000453996 ZMYM1Q5SVZ6 1142 aa25.67■■□□□ 1.7
CTU2-202ENST00000453996 RBM8AQ9Y5S9 174 aaKnown RBP25.67■■□□□ 1.7
CTU2-202ENST00000453996 SNX14Q9Y5W7 946 aa25.67■■□□□ 1.7
CTU2-202ENST00000453996 KCNJ4P48050 445 aa25.67■■□□□ 1.7
CTU2-202ENST00000453996 NRXN2Q9P2S2 1712 aa25.66■■□□□ 1.7
CTU2-202ENST00000453996 DOCK2Q92608 1830 aa25.66■■□□□ 1.7
CTU2-202ENST00000453996 NLGN1Q8N2Q7 840 aa25.66■■□□□ 1.7
CTU2-202ENST00000453996 IL27Q8NEV9 243 aa25.66■■□□□ 1.7
CTU2-202ENST00000453996 SEC62Q99442 399 aaKnown RBP25.66■■□□□ 1.7
CTU2-202ENST00000453996 SLKQ9H2G2 1235 aaPredicted RBP25.66■■□□□ 1.7
CTU2-202ENST00000453996 NEK4P51957 841 aa25.65■■□□□ 1.7
CTU2-202ENST00000453996 NECTIN1Q15223 517 aa25.65■■□□□ 1.7
CTU2-202ENST00000453996 PRPF40BQ6NWY9 871 aaKnown RBP25.65■■□□□ 1.7
CTU2-202ENST00000453996 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.65■■□□□ 1.79e-8■■■□□ 18
CTU2-202ENST00000453996 ANKRD2Q9GZV1 360 aa25.65■■□□□ 1.7
CTU2-202ENST00000453996 MYO5AQ9Y4I1 1855 aaKnown RBP25.65■■□□□ 1.7
CTU2-202ENST00000453996 CYP2E1P05181 493 aaPredicted RBP25.64■■□□□ 1.7
CTU2-202ENST00000453996 GRAPQ13588 217 aa25.64■■□□□ 1.7
CTU2-202ENST00000453996 CCDC129Q6ZRS4 1044 aa25.64■■□□□ 1.7
CTU2-202ENST00000453996 GRAPLQ8TC17 118 aaPredicted RBP25.64■■□□□ 1.7
CTU2-202ENST00000453996 KCNB2Q92953 911 aa25.64■■□□□ 1.7
CTU2-202ENST00000453996 HMG20BQ9P0W2 317 aa25.64■■□□□ 1.7
CTU2-202ENST00000453996 PNPLA7Q6ZV29 1317 aa25.64■■□□□ 1.69
CTU2-202ENST00000453996 CRY2Q49AN0 593 aa25.64■■□□□ 1.69
CTU2-202ENST00000453996 RASEFQ8IZ41 740 aa25.64■■□□□ 1.69
CTU2-202ENST00000453996 SPATA5Q8NB90 893 aa25.64■■□□□ 1.69
CTU2-202ENST00000453996 SPRYD3Q8NCJ5 442 aa25.64■■□□□ 1.69
CTU2-202ENST00000453996 RPGRQ92834 1020 aaKnown RBP25.64■■□□□ 1.69
CTU2-202ENST00000453996 BCAMP50895 628 aa25.63■■□□□ 1.69
CTU2-202ENST00000453996 RASGRF1Q13972 1273 aa25.63■■□□□ 1.69
CTU2-202ENST00000453996 ZSCAN25Q6NSZ9 544 aa25.63■■□□□ 1.69
CTU2-202ENST00000453996 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
CTU2-202ENST00000453996 MAST3O60307 1309 aa25.62■■□□□ 1.69
CTU2-202ENST00000453996 ZKSCAN1P17029 563 aaPredicted RBP25.62■■□□□ 1.69
CTU2-202ENST00000453996 SLFNL1Q499Z3 407 aa25.62■■□□□ 1.69
CTU2-202ENST00000453996 CREB3L3Q68CJ9 461 aa25.62■■□□□ 1.69
CTU2-202ENST00000453996 RNF20Q5VTR2 975 aa25.61■■□□□ 1.69
CTU2-202ENST00000453996 CAMKK2Q96RR4 588 aa25.61■■□□□ 1.69
CTU2-202ENST00000453996 ANKRD31Q8N7Z5 1873 aa25.61■■□□□ 1.69
CTU2-202ENST00000453996 ZNF804BA4D1E1 1349 aa25.61■■□□□ 1.69
CTU2-202ENST00000453996 MCM2P49736 904 aa25.61■■□□□ 1.69
CTU2-202ENST00000453996 EZH2Q15910 746 aaKnown RBP25.61■■□□□ 1.69
CTU2-202ENST00000453996 PIH1D3Q9NQM4 214 aaKnown RBP25.61■■□□□ 1.69
CTU2-202ENST00000453996 EN1Q05925 392 aaPredicted RBP25.6■■□□□ 1.69
CTU2-202ENST00000453996 APPBP2Q92624 585 aa25.6■■□□□ 1.69
CTU2-202ENST00000453996 UPF3BQ9BZI7 483 aaKnown RBP25.6■■□□□ 1.69
CTU2-202ENST00000453996 U3KPZ7 1027 aaPredicted RBP25.6■■□□□ 1.69
CTU2-202ENST00000453996 SLC27A2O14975 620 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 HSP90AA1P07900 732 aaKnown RBP25.59■■□□□ 1.69
CTU2-202ENST00000453996 WASHC4Q2M389 1173 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 CAVIN4Q5BKX8 364 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 RBM17Q96I25 401 aaKnown RBP25.59■■□□□ 1.69
CTU2-202ENST00000453996 GNL3LQ9NVN8 582 aaKnown RBP25.59■■□□□ 1.69
CTU2-202ENST00000453996 MYH13Q9UKX3 1938 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 M0R2C6 588 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 OSBP2Q969R2 916 aa25.59■■□□□ 1.69
CTU2-202ENST00000453996 IDH1O75874 414 aaKnown RBP25.58■■□□□ 1.69
CTU2-202ENST00000453996 GYG1P46976 350 aa25.58■■□□□ 1.69
CTU2-202ENST00000453996 DSCC1Q9BVC3 393 aa25.58■■□□□ 1.69
CTU2-202ENST00000453996 TM6SF1Q9BZW5 370 aa25.58■■□□□ 1.69
CTU2-202ENST00000453996 WTIPA6NIX2 430 aaPredicted RBP25.57■■□□□ 1.68
CTU2-202ENST00000453996 ADD2P35612 726 aa25.57■■□□□ 1.68
CTU2-202ENST00000453996 KLRG2A4D1S0 409 aaPredicted RBP25.56■■□□□ 1.68
CTU2-202ENST00000453996 SLC9C2Q5TAH2 1124 aa25.56■■□□□ 1.68
CTU2-202ENST00000453996 ANO8Q9HCE9 1232 aaPredicted RBP25.56■■□□□ 1.68
CTU2-202ENST00000453996 CASTP20810 708 aaKnown RBP25.56■■□□□ 1.68
CTU2-202ENST00000453996 UBE3CQ15386 1083 aa25.56■■□□□ 1.68
CTU2-202ENST00000453996 SLC15A2Q16348 729 aa25.56■■□□□ 1.68
CTU2-202ENST00000453996 VPS37DQ86XT2 251 aa25.56■■□□□ 1.68
CTU2-202ENST00000453996 JAKMIP1Q96N16 626 aaKnown RBP25.56■■□□□ 1.68
CTU2-202ENST00000453996 STK32BQ9NY57 414 aa25.56■■□□□ 1.68
CTU2-202ENST00000453996 RPAP1Q9BWH6 1393 aaPredicted RBP25.55■■□□□ 1.68
CTU2-202ENST00000453996 HOXA10P31260 410 aaPredicted RBP25.55■■□□□ 1.68
CTU2-202ENST00000453996 SF3B2Q13435 895 aaKnown RBP25.55■■□□□ 1.68
CTU2-202ENST00000453996 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
CTU2-202ENST00000453996 MMP10P09238 476 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 MAP3K12Q12852 859 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 ADCK5Q3MIX3 580 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 FAM84BQ96KN1 310 aaPredicted RBP25.54■■□□□ 1.68
CTU2-202ENST00000453996 BRIP1Q9BX63 1249 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 HSPD1P10809 573 aaKnown RBP25.54■■□□□ 1.68
CTU2-202ENST00000453996 PDE6AP16499 860 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 TSGA10IPQ3SY00 556 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 VPS53Q5VIR6 699 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 WWC3Q9ULE0 1092 aa25.54■■□□□ 1.68
CTU2-202ENST00000453996 XDHP47989 1333 aa25.53■■□□□ 1.68
CTU2-202ENST00000453996 PSMA5P28066 241 aa25.53■■□□□ 1.68
CTU2-202ENST00000453996 BAG6P46379 1132 aa25.53■■□□□ 1.68
CTU2-202ENST00000453996 FBXO33Q7Z6M2 555 aa25.53■■□□□ 1.68
CTU2-202ENST00000453996 CRAMP1Q96RY5 1269 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms