RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
HSPG2-207ENST00000453796 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 PCNTO95613 3336 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 EGFRP00533 1210 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 SAMD7Q7Z3H4 446 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
HSPG2-207ENST00000453796 ZC3H15Q8WU90 426 aaKnown RBP18.34■□□□□ 0.53
HSPG2-207ENST00000453796 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
HSPG2-207ENST00000453796 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.52
HSPG2-207ENST00000453796 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
HSPG2-207ENST00000453796 PUS3Q9BZE2 481 aaKnown RBP18.33■□□□□ 0.52
HSPG2-207ENST00000453796 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
HSPG2-207ENST00000453796 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-207ENST00000453796 DACT2Q5SW24 774 aa18.32■□□□□ 0.52
HSPG2-207ENST00000453796 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
HSPG2-207ENST00000453796 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
HSPG2-207ENST00000453796 BCAR3O75815 825 aa18.31■□□□□ 0.52
HSPG2-207ENST00000453796 KCNJ4P48050 445 aa18.31■□□□□ 0.52
HSPG2-207ENST00000453796 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-207ENST00000453796 STRIP1Q5VSL9 837 aa18.31■□□□□ 0.52
HSPG2-207ENST00000453796 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
HSPG2-207ENST00000453796 TRAF5O00463 557 aa18.3■□□□□ 0.52
HSPG2-207ENST00000453796 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
HSPG2-207ENST00000453796 CD209Q9NNX6 404 aa18.3■□□□□ 0.52
HSPG2-207ENST00000453796 TRIM27P14373 513 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-207ENST00000453796 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 CST9Q5W186 159 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 MXD3Q9BW11 206 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 GLIS2Q9BZE0 524 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-207ENST00000453796 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
HSPG2-207ENST00000453796 PLIN1O60240 522 aa18.28■□□□□ 0.52
HSPG2-207ENST00000453796 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-207ENST00000453796 UBE4AQ14139 1066 aa18.28■□□□□ 0.52
HSPG2-207ENST00000453796 VGLL2Q8N8G2 317 aa18.28■□□□□ 0.52
HSPG2-207ENST00000453796 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
HSPG2-207ENST00000453796 MEIS3Q99687 375 aa18.28■□□□□ 0.52
HSPG2-207ENST00000453796 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 USP17L8P0C7I0 530 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 IL1R1P14778 569 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
HSPG2-207ENST00000453796 TTLL5Q6EMB2 1281 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.52
HSPG2-207ENST00000453796 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.52
HSPG2-207ENST00000453796 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
HSPG2-207ENST00000453796 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
HSPG2-207ENST00000453796 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
HSPG2-207ENST00000453796 GTF2IP78347 998 aa18.26■□□□□ 0.51
HSPG2-207ENST00000453796 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
HSPG2-207ENST00000453796 ZNF804AQ7Z570 1209 aa18.26■□□□□ 0.51
HSPG2-207ENST00000453796 MYOZ2Q9NPC6 264 aa18.26■□□□□ 0.51
HSPG2-207ENST00000453796 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-207ENST00000453796 LRRFIP2Q9Y608 721 aaKnown RBP18.25■□□□□ 0.51
HSPG2-207ENST00000453796 THSD7BQ9C0I4 1608 aa18.24■□□□□ 0.51
HSPG2-207ENST00000453796 USP48Q86UV5 1035 aa18.24■□□□□ 0.51
HSPG2-207ENST00000453796 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
HSPG2-207ENST00000453796 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-207ENST00000453796 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
HSPG2-207ENST00000453796 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-207ENST00000453796 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
HSPG2-207ENST00000453796 MYH13Q9UKX3 1938 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 PDE8BO95263 885 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 MMP14P50281 582 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 SCARF1Q14162 830 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 METTL24Q5JXM2 366 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 DLK2Q6UY11 383 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 TDRD7Q8NHU6 1098 aaKnown RBP18.23■□□□□ 0.51
HSPG2-207ENST00000453796 DCPSQ96C86 337 aaKnown RBP18.23■□□□□ 0.51
HSPG2-207ENST00000453796 TLL2Q9Y6L7 1015 aa18.23■□□□□ 0.51
HSPG2-207ENST00000453796 EYA2O00167 538 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 CELF2O95319 508 aaKnown RBP18.22■□□□□ 0.51
HSPG2-207ENST00000453796 GNAI3P08754 354 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 FGFR2P21802 821 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 GYG1P46976 350 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 VEGFBP49765 207 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 FKBP1AP62942 108 aaKnown RBP18.22■□□□□ 0.51
HSPG2-207ENST00000453796 DEFB115Q30KQ5 88 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 KRT26Q7Z3Y9 468 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 CLUAP1Q96AJ1 413 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 HDAC5Q9UQL6 1122 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 FAM205AQ6ZU69 1335 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
HSPG2-207ENST00000453796 ADM5C9JUS6 153 aa18.21■□□□□ 0.51
HSPG2-207ENST00000453796 SASH1O94885 1247 aa18.21■□□□□ 0.51
HSPG2-207ENST00000453796 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
HSPG2-207ENST00000453796 FBXO33Q7Z6M2 555 aa18.21■□□□□ 0.51
HSPG2-207ENST00000453796 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.51
HSPG2-207ENST00000453796 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
HSPG2-207ENST00000453796 ZBED3Q96IU2 234 aaPredicted RBP18.21■□□□□ 0.51
HSPG2-207ENST00000453796 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms