RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
LINC01961-201ENST00000449954 POLR2AP24928 1970 aaKnown RBP10.7□□□□□ -0.7
LINC01961-201ENST00000449954 ZNF609O15014 1411 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 A0A1W2PPC1 479 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 PRAMEF22A3QJZ6 481 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 PSEN2P49810 448 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
LINC01961-201ENST00000449954 TCERG1O14776 1098 aaKnown RBP10.68□□□□□ -0.7
LINC01961-201ENST00000449954 EGFRP00533 1210 aa10.68□□□□□ -0.7
LINC01961-201ENST00000449954 IL13P35225 146 aa10.68□□□□□ -0.7
LINC01961-201ENST00000449954 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
LINC01961-201ENST00000449954 SLC51AQ86UW1 340 aa10.68□□□□□ -0.7
LINC01961-201ENST00000449954 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
LINC01961-201ENST00000449954 ERO1AQ96HE7 468 aa10.68□□□□□ -0.7
LINC01961-201ENST00000449954 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
LINC01961-201ENST00000449954 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 DPYSL4O14531 572 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 FOSBP53539 338 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 MPNDQ8N594 471 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 ZNF333Q96JL9 665 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
LINC01961-201ENST00000449954 DDX60Q8IY21 1712 aaKnown RBP10.67□□□□□ -0.7
LINC01961-201ENST00000449954 PSMD14O00487 310 aa10.66□□□□□ -0.7
LINC01961-201ENST00000449954 PIP4K2AP48426 406 aaPredicted RBP10.66□□□□□ -0.7
LINC01961-201ENST00000449954 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
LINC01961-201ENST00000449954 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
LINC01961-201ENST00000449954 SPTBN5Q9NRC6 3674 aaKnown RBP10.65□□□□□ -0.7
LINC01961-201ENST00000449954 HLFQ16534 295 aa10.65□□□□□ -0.7
LINC01961-201ENST00000449954 RBM26Q5T8P6 1007 aaKnown RBP10.65□□□□□ -0.7
LINC01961-201ENST00000449954 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.7
LINC01961-201ENST00000449954 SP8Q8IXZ3 490 aa10.65□□□□□ -0.7
LINC01961-201ENST00000449954 R3HDMLQ9H3Y0 253 aa10.65□□□□□ -0.7
LINC01961-201ENST00000449954 USP16Q9Y5T5 823 aa10.65□□□□□ -0.7
LINC01961-201ENST00000449954 KDM3BQ7LBC6 1761 aa10.65□□□□□ -0.71
LINC01961-201ENST00000449954 DUOX1Q9NRD9 1551 aa10.65□□□□□ -0.71
LINC01961-201ENST00000449954 ABCC4O15439 1325 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 ERVV-1B6SEH8 477 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 BBOX1O75936 387 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
LINC01961-201ENST00000449954 INHBEP58166 350 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 TCIRG1Q13488 830 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 NLRP3Q96P20 1036 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 EFCC1Q9HA90 598 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 STXBP5LQ9Y2K9 1186 aa10.64□□□□□ -0.71
LINC01961-201ENST00000449954 GNAT3A8MTJ3 354 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 HMOX1P09601 288 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 E2F4Q16254 413 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 SLC9C1Q4G0N8 1177 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
LINC01961-201ENST00000449954 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
LINC01961-201ENST00000449954 LRRC37AA6NMS7 1700 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 CEMIPQ8WUJ3 1361 aa10.63□□□□□ -0.71
LINC01961-201ENST00000449954 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 NBPF26B4DH59 902 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 UBE2Q2LH0YL09 131 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 NF2P35240 595 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
LINC01961-201ENST00000449954 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 TMC4Q7Z404 712 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 DPF3Q92784 378 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 ZDHHC16Q969W1 377 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 NR2E3Q9Y5X4 410 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 NUP98P52948 1817 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 LAMB1P07942 1786 aa10.62□□□□□ -0.71
LINC01961-201ENST00000449954 ASTN2O75129 1339 aaPredicted RBP10.61□□□□□ -0.71
LINC01961-201ENST00000449954 UBN2Q6ZU65 1347 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 MANSC4A6NHS7 340 aaPredicted RBP10.61□□□□□ -0.71
LINC01961-201ENST00000449954 NTSR2O95665 410 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 TTLL12Q14166 644 aaPredicted RBP10.61□□□□□ -0.71
LINC01961-201ENST00000449954 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 MOB2Q70IA6 237 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 CD99L2Q8TCZ2 262 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 HTATIP2Q9BUP3 242 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
LINC01961-201ENST00000449954 MAP3K15Q6ZN16 1313 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
LINC01961-201ENST00000449954 PTPREP23469 700 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 ZNF280AP59817 542 aaPredicted RBP10.6□□□□□ -0.71
LINC01961-201ENST00000449954 SCARF1Q14162 830 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 WASHC4Q2M389 1173 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 KIF6Q6ZMV9 814 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC01961-201ENST00000449954 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 DBNDD1Q9H9R9 158 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 RTL9Q8NET4 1388 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
LINC01961-201ENST00000449954 KCNQ3O43525 872 aa10.59□□□□□ -0.71
LINC01961-201ENST00000449954 SP3Q02447 781 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms