RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 ZKSCAN2Q63HK3 967 aa22.52■■□□□ 1.2
RFTN1-205ENST00000449415 CNTROBQ8N137 903 aa22.52■■□□□ 1.2
RFTN1-205ENST00000449415 TRPM4Q8TD43 1214 aa22.52■■□□□ 1.2
RFTN1-205ENST00000449415 COA1Q9GZY4 146 aa22.52■■□□□ 1.2
RFTN1-205ENST00000449415 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
RFTN1-205ENST00000449415 SAMD7Q7Z3H4 446 aa22.51■■□□□ 1.19
RFTN1-205ENST00000449415 DPF2Q92785 391 aa22.51■■□□□ 1.19
RFTN1-205ENST00000449415 ZNF646O15015 1829 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 USP17L3A6NCW0 530 aa22.5■■□□□ 1.19
RFTN1-205ENST00000449415 USP17L4A6NCW7 530 aa22.5■■□□□ 1.19
RFTN1-205ENST00000449415 ITGBL1O95965 494 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 RPS12P25398 132 aaKnown RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 TBC1D10BQ4KMP7 808 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 RBM26Q5T8P6 1007 aaKnown RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 RSBN1LQ6PCB5 846 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-205ENST00000449415 USP17L1Q7RTZ2 530 aa22.5■■□□□ 1.19
RFTN1-205ENST00000449415 HIRAP54198 1017 aaPredicted RBP22.49■■□□□ 1.19
RFTN1-205ENST00000449415 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
RFTN1-205ENST00000449415 RIPOR2Q9Y4F9 1068 aa22.49■■□□□ 1.19
RFTN1-205ENST00000449415 METTL24Q5JXM2 366 aa22.48■■□□□ 1.19
RFTN1-205ENST00000449415 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
RFTN1-205ENST00000449415 PASKQ96RG2 1323 aa22.48■■□□□ 1.19
RFTN1-205ENST00000449415 IRS2Q9Y4H2 1338 aa22.48■■□□□ 1.19
RFTN1-205ENST00000449415 POLR2AP24928 1970 aaKnown RBP22.47■■□□□ 1.19
RFTN1-205ENST00000449415 EGFRP00533 1210 aa22.47■■□□□ 1.19
RFTN1-205ENST00000449415 RFX5P48382 616 aaPredicted RBP22.47■■□□□ 1.19
RFTN1-205ENST00000449415 CD209Q9NNX6 404 aa22.47■■□□□ 1.19
RFTN1-205ENST00000449415 HDAC5Q9UQL6 1122 aa22.47■■□□□ 1.19
RFTN1-205ENST00000449415 MROH5Q6ZUA9 1318 aa22.47■■□□□ 1.19
RFTN1-205ENST00000449415 GNAI3P08754 354 aa22.46■■□□□ 1.19
RFTN1-205ENST00000449415 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.19
RFTN1-205ENST00000449415 C15orf52Q6ZUT6 534 aaKnown RBP22.46■■□□□ 1.19
RFTN1-205ENST00000449415 AGBL3Q8NEM8 1001 aa22.46■■□□□ 1.19
RFTN1-205ENST00000449415 GTF2IP78347 998 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 DACT2Q5SW24 774 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 TTLL5Q6EMB2 1281 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 ZNF804AQ7Z570 1209 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 DNAJC5GQ8N7S2 189 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 SIL1Q9H173 461 aa22.45■■□□□ 1.18
RFTN1-205ENST00000449415 CEP350Q5VT06 3117 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 TRAF5O00463 557 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 PTPN12Q05209 780 aaKnown RBP22.44■■□□□ 1.18
RFTN1-205ENST00000449415 UBE4AQ14139 1066 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 KIF4BQ2VIQ3 1234 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 STRIP1Q5VSL9 837 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 FTSJ3Q8IY81 847 aaKnown RBP22.44■■□□□ 1.18
RFTN1-205ENST00000449415 GMLQ99445 158 aa22.44■■□□□ 1.18
RFTN1-205ENST00000449415 TRPM7Q96QT4 1865 aa22.43■■□□□ 1.18
RFTN1-205ENST00000449415 EYA2O00167 538 aa22.43■■□□□ 1.18
RFTN1-205ENST00000449415 USP17L8P0C7I0 530 aa22.43■■□□□ 1.18
RFTN1-205ENST00000449415 GYG1P46976 350 aa22.43■■□□□ 1.18
RFTN1-205ENST00000449415 GLIS2Q9BZE0 524 aaPredicted RBP22.43■■□□□ 1.18
RFTN1-205ENST00000449415 JAG2Q9Y219 1238 aa22.43■■□□□ 1.18
RFTN1-205ENST00000449415 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
RFTN1-205ENST00000449415 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
RFTN1-205ENST00000449415 PA2G4Q9UQ80 394 aaKnown RBP22.42■■□□□ 1.18
RFTN1-205ENST00000449415 ZNF609O15014 1411 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 PDE8BO95263 885 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 RLBP1P12271 317 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
RFTN1-205ENST00000449415 ITPRIPQ8IWB1 547 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 VGLL2Q8N8G2 317 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 ZC3H15Q8WU90 426 aaKnown RBP22.41■■□□□ 1.18
RFTN1-205ENST00000449415 PGAP2Q9UHJ9 254 aa22.41■■□□□ 1.18
RFTN1-205ENST00000449415 TMEM88BA6NKF7 163 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 GNAI2P04899 355 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 IL1R1P14778 569 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
RFTN1-205ENST00000449415 ATG9AQ7Z3C6 839 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 KIAA0825Q8IV33 1275 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 KLRG1Q96E93 195 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 MYOZ2Q9NPC6 264 aa22.4■■□□□ 1.18
RFTN1-205ENST00000449415 ASTN2O75129 1339 aaPredicted RBP22.39■■□□□ 1.18
RFTN1-205ENST00000449415 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
RFTN1-205ENST00000449415 SRGAP3O43295 1099 aa22.39■■□□□ 1.17
RFTN1-205ENST00000449415 USP48Q86UV5 1035 aa22.39■■□□□ 1.17
RFTN1-205ENST00000449415 FAM84BQ96KN1 310 aaPredicted RBP22.39■■□□□ 1.17
RFTN1-205ENST00000449415 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
RFTN1-205ENST00000449415 DLK2Q6UY11 383 aa22.38■■□□□ 1.17
RFTN1-205ENST00000449415 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
RFTN1-205ENST00000449415 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
RFTN1-205ENST00000449415 IQSEC3Q9UPP2 1182 aaPredicted RBP22.38■■□□□ 1.17
RFTN1-205ENST00000449415 SCARF1Q14162 830 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 PUM3Q15397 648 aaKnown RBP22.37■■□□□ 1.17
RFTN1-205ENST00000449415 CDC37L1Q7L3B6 337 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 VPS37DQ86XT2 251 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 CERS5Q8N5B7 392 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
RFTN1-205ENST00000449415 C1orf115Q9H7X2 142 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 ZNF408Q9H9D4 720 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 GGA3Q9NZ52 723 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 RCAN3Q9UKA8 241 aa22.37■■□□□ 1.17
RFTN1-205ENST00000449415 F8W031 263 aaPredicted RBP22.36■■□□□ 1.17
RFTN1-205ENST00000449415 CIAO1O76071 339 aa22.36■■□□□ 1.17
RFTN1-205ENST00000449415 IFIT1P09914 478 aaKnown RBP22.36■■□□□ 1.17
RFTN1-205ENST00000449415 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
RFTN1-205ENST00000449415 COPRSQ9NQ92 184 aa22.36■■□□□ 1.17
RFTN1-205ENST00000449415 ADM5C9JUS6 153 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 SASH1O94885 1247 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 FGFR2P21802 821 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms