RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LRFN2Q9ULH4 789 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 RPAP2Q8IXW5 612 aaPredicted RBP6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 TEX11Q8IYF3 940 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC102AQ96A19 550 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 METTL22Q9BUU2 404 aaPredicted RBP6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP19O94966 1318 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 TMEM88BA6NKF7 163 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 CERS3Q8IU89 383 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 EFCC1Q9HA90 598 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 ANO2Q9NQ90 1003 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 GCC2Q8IWJ2 1684 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 IQCA1Q86XH1 822 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 PIBF1Q8WXW3 757 aa6.65□□□□□ -1.35
CDC42BPA-209ENST00000448940 COL15A1P39059 1388 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 PRPF40BQ6NWY9 871 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 RNF41Q9H4P4 317 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 KIDINS220Q9ULH0 1771 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 TNPO2O14787 897 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 REC8O95072 547 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 KRT18P05783 430 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 PREX1Q8TCU6 1659 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 MYO3BQ8WXR4 1341 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 NCAPG2Q86XI2 1143 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 CDK5RAP3Q96JB5 506 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 IL1RAPL2Q9NP60 686 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 SEC63Q9UGP8 760 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 DIP2AQ14689 1571 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 NOP56O00567 594 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 LIG1P18858 919 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 ALDH1L2Q3SY69 923 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 ODF2Q5BJF6 829 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 HOMEZQ8IX15 550 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 ABI1Q8IZP0 508 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 RANBP6O60518 1105 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 CDC37L1Q7L3B6 337 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 GRAPQ13588 217 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 AAMPQ13685 434 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 GRAPLQ8TC17 118 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 RAB23Q9ULC3 237 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 CPDO75976 1380 aa6.64□□□□□ -1.35
CDC42BPA-209ENST00000448940 BCAR3O75815 825 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZNRF3Q9ULT6 936 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 SF3A1Q15459 793 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC47Q96A33 483 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 IL16Q14005 1332 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 RAD50Q92878 1312 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 CLRN2A0PK11 232 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 NEBLO76041 1014 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 NUP133Q8WUM0 1156 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 CPLX3Q8WVH0 158 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 TNPO1Q92973 898 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 SECISBP2LQ93073 1101 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 PIK3C2BO00750 1634 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 TSPY2A6NKD2 308 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 CWF19L2Q2TBE0 894 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 ERO1AQ96HE7 468 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 C1orf115Q9H7X2 142 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 CDC42BPBQ9Y5S2 1711 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 KIF1BO60333 1816 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 RAB11FIP3O75154 756 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 BCAMP50895 628 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZHX3Q9H4I2 956 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 HCN4Q9Y3Q4 1203 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 ZC3H13Q5T200 1668 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 SLIT1O75093 1534 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 HEG1Q9ULI3 1381 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 REREQ9P2R6 1566 aa6.63□□□□□ -1.35
CDC42BPA-209ENST00000448940 APOBEC3FQ8IUX4 373 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 GTF3C6Q969F1 213 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 STX8Q9UNK0 236 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 ARHGAP23Q9P227 1491 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 ASXL1Q8IXJ9 1541 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 PTPRUQ92729 1446 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC69A6NI79 296 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 H3BQV1 296 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 PUM3Q15397 648 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 IFFO2Q5TF58 517 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 CHADLQ6NUI6 762 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 RUFY4Q6ZNE9 571 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 IL17REQ8NFR9 667 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 TRIM47Q96LD4 638 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 CNPY2Q9Y2B0 182 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 FRMPD1Q5SYB0 1578 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 NR1I2O75469 434 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 SOX10P56693 466 aa6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 CCDC8Q9H0W5 538 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-209ENST00000448940 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms