RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 KCNK9Q9NPC2 374 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 ECHDC1Q9NTX5 307 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 GJB2P29033 226 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 RILPL1Q5EBL4 403 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 ZNF804AQ7Z570 1209 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 CACNA2D3Q8IZS8 1091 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 PLCG2P16885 1265 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 FYB2Q5VWT5 728 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 GPTP24298 496 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 CALML3P27482 149 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 TNNI2P48788 182 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 GABPAQ06546 454 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 VCXQ9H320 206 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 SH2D4AQ9H788 454 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 HSPA1LP34931 641 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 SH2D4BQ5SQS7 431 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 KRT222Q8N1A0 295 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 TMEM57Q8N5G2 664 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 JDP2Q8WYK2 163 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 IFT74Q96LB3 600 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 ZSWIM4Q9H7M6 989 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 CTAGE9A4FU28 777 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 ZBTB43O43298 467 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 CCT6AP40227 531 aaKnown RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 NEDD9Q14511 834 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 BACH1O14867 736 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 DAPK3O43293 454 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 TRPC3Q13507 836 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 RTN1Q16799 776 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 RRP36Q96EU6 259 aaKnown RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 CCDC42Q96M95 316 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 KIF21BO75037 1637 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 TUBBP07437 444 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 TAOK1Q7L7X3 1001 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 RSRC1Q96IZ7 334 aaKnown RBP9.35□□□□□ -0.91
LPP-208ENST00000448637 RSPH14Q9UHP6 348 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 AGTPBP1Q9UPW5 1226 aa9.35□□□□□ -0.91
LPP-208ENST00000448637 ITIH3Q06033 890 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
LPP-208ENST00000448637 ABCC11Q96J66 1382 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 PPP1R21Q6ZMI0 780 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 SDCCAG8Q86SQ7 713 aaPredicted RBP9.34□□□□□ -0.91
LPP-208ENST00000448637 EBAG9O00559 213 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 SETSIPP0DME0 302 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 AFMP43652 599 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 ATP2B3Q16720 1220 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 NACA2Q9H009 215 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 TMOD4Q9NZQ9 345 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 ANKFY1Q9P2R3 1169 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 ADCY5O95622 1261 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 CYP7A1P22680 504 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 TMPOP42166 694 aaKnown RBP9.34□□□□□ -0.91
LPP-208ENST00000448637 VAV2P52735 878 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 CCDC65Q8IXS2 484 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.34□□□□□ -0.91
LPP-208ENST00000448637 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 RTL9Q8NET4 1388 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.911e-5■■■■□ 25.7
LPP-208ENST00000448637 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
LPP-208ENST00000448637 UBE2HP62256 183 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 LIN9Q5TKA1 542 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 C10orf67Q8IYJ2 551 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 CCDC26Q8TAB7 109 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 ANKRD24Q8TF21 1146 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 TSGA10Q9BZW7 698 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
LPP-208ENST00000448637 MUM1L1Q5H9M0 696 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 FGD6Q6ZV73 1430 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
LPP-208ENST00000448637 EYA3Q99504 573 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
LPP-208ENST00000448637 PTPRCP08575 1304 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 CETN3O15182 167 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 SEPT14Q6ZU15 432 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 CCDC25Q86WR0 208 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 CEP57Q86XR8 500 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 HAUS8Q9BT25 410 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 VEZTQ9HBM0 779 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 PPP1R2P41236 205 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 CEP85LQ5SZL2 805 aa9.33□□□□□ -0.92
LPP-208ENST00000448637 BCAP29Q9UHQ4 241 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms