RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 ATP8B1O43520 1251 aa18.58■□□□□ 0.56
CNOT3-204ENST00000447684 SERPINC1P01008 464 aa18.58■□□□□ 0.56
CNOT3-204ENST00000447684 PPP2R3AQ06190 1150 aa18.58■□□□□ 0.56
CNOT3-204ENST00000447684 SCRN1Q12765 414 aa18.58■□□□□ 0.56
CNOT3-204ENST00000447684 MRPS27Q92552 414 aaKnown RBP18.58■□□□□ 0.56
CNOT3-204ENST00000447684 ZNF396Q96N95 335 aaPredicted RBP18.58■□□□□ 0.56
CNOT3-204ENST00000447684 NEK1Q96PY6 1258 aa18.58■□□□□ 0.56
CNOT3-204ENST00000447684 SEC62Q99442 399 aaKnown RBP18.58■□□□□ 0.56
CNOT3-204ENST00000447684 ACEP12821 1306 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 USP6P35125 1406 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 NDUFA8P51970 172 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 FANCCQ00597 558 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 CFAP100Q494V2 611 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 EDC3Q96F86 508 aaKnown RBP18.57■□□□□ 0.56
CNOT3-204ENST00000447684 UBXN6Q9BZV1 441 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 FLT4P35916 1363 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 ACTN2P35609 894 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 NUTM2GQ5VZR2 741 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 GPR161Q8N6U8 529 aaKnown RBP18.57■□□□□ 0.56
CNOT3-204ENST00000447684 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-204ENST00000447684 KIAA1468Q9P260 1216 aa18.57■□□□□ 0.56
CNOT3-204ENST00000447684 ICE2Q659A1 982 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 EXOC4Q96A65 974 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 NOM1Q5C9Z4 860 aaKnown RBP18.56■□□□□ 0.56
CNOT3-204ENST00000447684 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 WDR24Q96S15 920 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
CNOT3-204ENST00000447684 TLR7Q9NYK1 1049 aaKnown RBP18.56■□□□□ 0.56
CNOT3-204ENST00000447684 LONRF2Q1L5Z9 754 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 SKIDA1Q1XH10 827 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 UBASH3AP57075 661 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 HSP90AA4PQ58FG1 418 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 PDILTQ8N807 584 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 DRC1Q96MC2 740 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 EYA1Q99502 592 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
CNOT3-204ENST00000447684 PDE11AQ9HCR9 933 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 BABAM1Q9NWV8 329 aa18.55■□□□□ 0.56
CNOT3-204ENST00000447684 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 SLC3A2P08195 630 aaKnown RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 FOXR1Q6PIV2 292 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 ALDH8A1Q9H2A2 487 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 LOC102724159A0A0B4J2E5 919 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 ZSCAN12O43309 604 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 KCNJ6P48051 423 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 STK38Q15208 465 aa18.54■□□□□ 0.56
CNOT3-204ENST00000447684 PWP2Q15269 919 aaKnown RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 TTC31Q49AM3 519 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 EAF2Q96CJ1 260 aaPredicted RBP18.54■□□□□ 0.56
CNOT3-204ENST00000447684 AMPHP49418 695 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 CCDC129Q6ZRS4 1044 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 DPF2Q92785 391 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 PHACTR2O75167 634 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 TOP1P11387 765 aaKnown RBP18.53■□□□□ 0.56
CNOT3-204ENST00000447684 APOBRQ0VD83 1088 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
CNOT3-204ENST00000447684 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
CNOT3-204ENST00000447684 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
CNOT3-204ENST00000447684 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.561e-5■■■■□ 21.3
CNOT3-204ENST00000447684 KRT32Q14532 448 aa18.52■□□□□ 0.56
CNOT3-204ENST00000447684 GPATCH11Q8N954 259 aa18.52■□□□□ 0.56
CNOT3-204ENST00000447684 NSUN7Q8NE18 718 aaKnown RBP18.52■□□□□ 0.56
CNOT3-204ENST00000447684 GOLGA1Q92805 767 aa18.52■□□□□ 0.56
CNOT3-204ENST00000447684 CHGBP05060 677 aa18.52■□□□□ 0.55
CNOT3-204ENST00000447684 KARSQ15046 597 aaKnown RBP18.52■□□□□ 0.55
CNOT3-204ENST00000447684 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.55
CNOT3-204ENST00000447684 IL17REQ8NFR9 667 aa18.52■□□□□ 0.55
CNOT3-204ENST00000447684 LTV1Q96GA3 475 aaPredicted RBP18.52■□□□□ 0.55
CNOT3-204ENST00000447684 SNRKQ9NRH2 765 aa18.52■□□□□ 0.55
CNOT3-204ENST00000447684 JRKLQ9Y4A0 524 aa18.52■□□□□ 0.55
CNOT3-204ENST00000447684 TAF5LO75529 589 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 PSME1Q06323 249 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
CNOT3-204ENST00000447684 DHX58Q96C10 678 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 PLEKHA4Q9H4M7 779 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 WWC2Q6AWC2 1192 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 PACS2Q86VP3 889 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
CNOT3-204ENST00000447684 PUF60Q9UHX1 559 aaKnown RBP18.51■□□□□ 0.55
CNOT3-204ENST00000447684 N4BP1O75113 896 aaKnown RBP18.5■□□□□ 0.55
CNOT3-204ENST00000447684 IVLP07476 585 aa18.5■□□□□ 0.55
CNOT3-204ENST00000447684 MTX1Q13505 466 aa18.5■□□□□ 0.55
CNOT3-204ENST00000447684 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms