RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 FBXL18Q96ME1 805 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 CNTNAP3BQ96NU0 1288 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 PHOX2BQ99453 314 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 CNTNAP3Q9BZ76 1288 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 GBA2Q9HCG7 927 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-205ENST00000447271 BCORQ6W2J9 1755 aa7.62□□□□□ -1.19
PTPN3-205ENST00000447271 SCNN1DP51172 638 aa7.62□□□□□ -1.19
PTPN3-205ENST00000447271 SHISA4Q96DD7 197 aa7.62□□□□□ -1.19
PTPN3-205ENST00000447271 NUDT16Q96DE0 195 aaKnown RBP7.62□□□□□ -1.19
PTPN3-205ENST00000447271 PPP4R2Q9NY27 417 aa7.62□□□□□ -1.19
PTPN3-205ENST00000447271 MYBBP1AQ9BQG0 1328 aaKnown RBP7.61□□□□□ -1.19
PTPN3-205ENST00000447271 ALPK3Q96L96 1907 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 ST20-MTHFSA0A0A6YYL1 179 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 FZD9O00144 591 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 SIK1P57059 783 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 COPS2P61201 443 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 ITPK1Q13572 414 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 UBE2OQ9C0C9 1292 aaKnown RBP7.61□□□□□ -1.19
PTPN3-205ENST00000447271 SEMA6BQ9H3T3 888 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 TMEM134Q9H6X4 195 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 IL21Q9HBE4 155 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 KNSTRNQ9Y448 316 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 ITGB4P16144 1822 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
PTPN3-205ENST00000447271 SMG6Q86US8 1419 aaKnown RBP7.61□□□□□ -1.19
PTPN3-205ENST00000447271 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
PTPN3-205ENST00000447271 RCCD1A6NED2 376 aa7.6□□□□□ -1.19
PTPN3-205ENST00000447271 MRPS5P82675 430 aaKnown RBP7.6□□□□□ -1.19
PTPN3-205ENST00000447271 DLK2Q6UY11 383 aa7.6□□□□□ -1.19
PTPN3-205ENST00000447271 UBE2Q1Q7Z7E8 422 aa7.6□□□□□ -1.19
PTPN3-205ENST00000447271 RASAL3Q86YV0 1011 aa7.6□□□□□ -1.19
PTPN3-205ENST00000447271 IRX2Q9BZI1 471 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-205ENST00000447271 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-205ENST00000447271 LCE2BO14633 110 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 DNAJB2P25686 324 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 PPP1R18Q6NYC8 613 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 USP48Q86UV5 1035 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 LURAP1LQ8IV03 231 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 EFCC1Q9HA90 598 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 THEGQ9P2T0 379 aa7.59□□□□□ -1.19
PTPN3-205ENST00000447271 SRP68Q9UHB9 627 aaKnown RBP7.59□□□□□ -1.19
PTPN3-205ENST00000447271 PTPRZ1P23471 2315 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-205ENST00000447271 POLR2AP24928 1970 aaKnown RBP7.59□□□□□ -1.2
PTPN3-205ENST00000447271 ZNF292O60281 2723 aa7.58□□□□□ -1.2
PTPN3-205ENST00000447271 MAGEA10P43363 369 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-205ENST00000447271 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-205ENST00000447271 ZCRB1Q8TBF4 217 aaKnown RBP7.58□□□□□ -1.2
PTPN3-205ENST00000447271 CD99L2Q8TCZ2 262 aa7.58□□□□□ -1.2
PTPN3-205ENST00000447271 ERO1AQ96HE7 468 aa7.58□□□□□ -1.2
PTPN3-205ENST00000447271 ADARB2Q9NS39 739 aaKnown RBP7.58□□□□□ -1.2
PTPN3-205ENST00000447271 ZMYND8Q9ULU4 1186 aaPredicted RBP7.58□□□□□ -1.2
PTPN3-205ENST00000447271 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
PTPN3-205ENST00000447271 ACACBO00763 2458 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 TLL1O43897 1013 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 EIF6P56537 245 aaKnown RBP7.57□□□□□ -1.2
PTPN3-205ENST00000447271 SOGA3Q5TF21 947 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 BLOC1S3Q6QNY0 202 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 PXYLP1Q8TE99 480 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 NLRP7Q8WX94 980 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 PUS7Q96PZ0 661 aaKnown RBP7.57□□□□□ -1.2
PTPN3-205ENST00000447271 UIMC1Q96RL1 719 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 PGAP2Q9UHJ9 254 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 ANKRD26Q9UPS8 1709 aa7.57□□□□□ -1.2
PTPN3-205ENST00000447271 NRXN2Q9P2S2 1712 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 ZNF609O15014 1411 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 TM4SF1P30408 202 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 TM4SF4P48230 202 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 PTCH2Q9Y6C5 1203 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 KDM3BQ7LBC6 1761 aa7.56□□□□□ -1.2
PTPN3-205ENST00000447271 MED19A0JLT2 244 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 FARP2O94887 1054 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 WDR43Q15061 677 aaKnown RBP eCLIP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 METTL3Q86U44 580 aaKnown RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 KCNH5Q8NCM2 988 aa7.55□□□□□ -1.2
PTPN3-205ENST00000447271 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 PPM1EQ8WY54 764 aa7.55□□□□□ -1.2
PTPN3-205ENST00000447271 EMID1Q96A84 441 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 KCNH6Q9H252 994 aa7.55□□□□□ -1.2
PTPN3-205ENST00000447271 NUDCQ9Y266 331 aa7.55□□□□□ -1.2
PTPN3-205ENST00000447271 COL11A2P13942 1736 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-205ENST00000447271 MAP1BP46821 2468 aaKnown RBP7.54□□□□□ -1.2
PTPN3-205ENST00000447271 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 GFRA3O60609 400 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 SYN1P17600 705 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 ID4P47928 161 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 FKBP4Q02790 459 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN3-205ENST00000447271 C7orf61Q8IZ16 206 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 PNNQ9H307 717 aaKnown RBP7.54□□□□□ -1.2
PTPN3-205ENST00000447271 COL2A1P02458 1487 aaPredicted RBP7.54□□□□□ -1.2
PTPN3-205ENST00000447271 MRC1P22897 1456 aa7.54□□□□□ -1.2
PTPN3-205ENST00000447271 ARFGEF2Q9Y6D5 1785 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms