RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SMPD1P17405 629 aa4.71□□□□□ -1.65
PMS1-215ENST00000447232 NCAPD2Q15021 1401 aa4.71□□□□□ -1.65
PMS1-215ENST00000447232 AKAP4Q5JQC9 854 aa4.71□□□□□ -1.65
PMS1-215ENST00000447232 PTCRAQ6ISU1 281 aaPredicted RBP4.71□□□□□ -1.65
PMS1-215ENST00000447232 SNIP1Q8TAD8 396 aaKnown RBP4.71□□□□□ -1.65
PMS1-215ENST00000447232 CACNA1SQ13698 1873 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 AKAP11Q9UKA4 1901 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 C6orf229H3BNL8 230 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 SERPINB2P05120 415 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 GPC2Q8N158 579 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 RNF186Q9NXI6 227 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 CEP290O15078 2479 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 TJP1Q07157 1748 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 HTTP42858 3142 aa4.71□□□□□ -1.66
PMS1-215ENST00000447232 FAM155AB1AL88 458 aaPredicted RBP4.7□□□□□ -1.66
PMS1-215ENST00000447232 J3QL48 77 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 AXIN1O15169 862 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 CELF2O95319 508 aaKnown RBP4.7□□□□□ -1.66
PMS1-215ENST00000447232 CRKLP46109 303 aaKnown RBP4.7□□□□□ -1.66
PMS1-215ENST00000447232 AMPHP49418 695 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 SMCPP49901 116 aaPredicted RBP4.7□□□□□ -1.66
PMS1-215ENST00000447232 CTC1Q2NKJ3 1217 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 USPL1Q5W0Q7 1092 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 COL25A1Q9BXS0 654 aaPredicted RBP4.7□□□□□ -1.66
PMS1-215ENST00000447232 UNC80Q8N2C7 3258 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 TRIM66O15016 1216 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 TRPA1O75762 1119 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 FBLN1P23142 703 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 WNT7BP56706 349 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 SOGA3Q5TF21 947 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 C7orf43Q8WVR3 580 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 ZNF622Q969S3 477 aaKnown RBP eCLIP4.7□□□□□ -1.66
PMS1-215ENST00000447232 NUDT12Q9BQG2 462 aa4.7□□□□□ -1.66
PMS1-215ENST00000447232 SCNN1DP51172 638 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 USP50Q70EL3 339 aaPredicted RBP4.69□□□□□ -1.66
PMS1-215ENST00000447232 PARP9Q8IXQ6 854 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 BRCA2P51587 3418 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 PAPPA2Q9BXP8 1791 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 PRPF40BQ6NWY9 871 aaKnown RBP4.69□□□□□ -1.66
PMS1-215ENST00000447232 INTS5Q6P9B9 1019 aaKnown RBP4.69□□□□□ -1.66
PMS1-215ENST00000447232 FBXO46Q6PJ61 603 aaPredicted RBP4.69□□□□□ -1.66
PMS1-215ENST00000447232 BRIP1Q9BX63 1249 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 A0A1W2PP64 1363 aa4.69□□□□□ -1.66
PMS1-215ENST00000447232 PHKG2P15735 406 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 PDE6BP35913 854 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 EPS15P42566 896 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 FKBP4Q02790 459 aaKnown RBP eCLIP4.68□□□□□ -1.66
PMS1-215ENST00000447232 BICDL1Q6ZP65 573 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 MPNDQ8N594 471 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 CNKSR1Q969H4 720 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 NARFQ9UHQ1 456 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 SOS1Q07889 1333 aaPredicted RBP4.68□□□□□ -1.66
PMS1-215ENST00000447232 KIAA0100Q14667 2235 aaKnown RBP4.68□□□□□ -1.66
PMS1-215ENST00000447232 MS4A1P11836 297 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 KIF23Q02241 960 aaPredicted RBP4.68□□□□□ -1.66
PMS1-215ENST00000447232 STYK1Q6J9G0 422 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 HPS1Q92902 700 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 TBC1D2Q9BYX2 928 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 ZNF277Q9NRM2 450 aaPredicted RBP4.68□□□□□ -1.66
PMS1-215ENST00000447232 EVA1BQ9NVM1 165 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 GMPR2Q9P2T1 348 aaKnown RBP4.68□□□□□ -1.66
PMS1-215ENST00000447232 PGAP2Q9UHJ9 254 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 SPG7Q9UQ90 795 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 TONSLQ96HA7 1378 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 COL4A5P29400 1685 aa4.68□□□□□ -1.66
PMS1-215ENST00000447232 CCNYL3P0C7X3 344 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 GJA5P36382 358 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 MTMR2Q13614 643 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SYNE4Q8N205 404 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 PRR7Q8TB68 274 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 PRDM6Q9NQX0 595 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SNED1Q8TER0 1413 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SPTBN5Q9NRC6 3674 aaKnown RBP4.67□□□□□ -1.66
PMS1-215ENST00000447232 CENPFP49454 3210 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SPDYE5A6NIY4 337 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 ERVV-2B6SEH9 535 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SIAH2O43255 324 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 SRGNP10124 158 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 LMOD1P29536 600 aaPredicted RBP4.67□□□□□ -1.66
PMS1-215ENST00000447232 HUNKP57058 714 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 PTPRNQ16849 979 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 CCDC93Q567U6 631 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 HSP90AB2PQ58FF8 381 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 DESI1Q6ICB0 168 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 RGMBQ6NW40 437 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 IFNL2Q8IZJ0 200 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 ZNF296Q8WUU4 475 aaPredicted RBP4.67□□□□□ -1.66
PMS1-215ENST00000447232 CSRNP1Q96S65 589 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 GLIS2Q9BZE0 524 aaPredicted RBP4.67□□□□□ -1.66
PMS1-215ENST00000447232 PCDHB15Q9Y5E8 787 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 VCANP13611 3396 aa4.67□□□□□ -1.66
PMS1-215ENST00000447232 H0YGN5 161 aa4.66□□□□□ -1.66
PMS1-215ENST00000447232 IARSP41252 1262 aaKnown RBP4.66□□□□□ -1.66
PMS1-215ENST00000447232 SH3BP2P78314 561 aa4.66□□□□□ -1.66
PMS1-215ENST00000447232 RRS1Q15050 365 aaKnown RBP4.66□□□□□ -1.66
PMS1-215ENST00000447232 NOM1Q5C9Z4 860 aaKnown RBP4.66□□□□□ -1.66
PMS1-215ENST00000447232 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
PMS1-215ENST00000447232 INTS3Q68E01 1043 aaKnown RBP4.66□□□□□ -1.66
PMS1-215ENST00000447232 PRR5LQ6MZQ0 368 aa4.66□□□□□ -1.66
PMS1-215ENST00000447232 RSBN1LQ6PCB5 846 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms