RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 GJB2P29033 226 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
PTCH2-203ENST00000447098 PYCARDQ9ULZ3 195 aa13.17□□□□□ -0.3
PTCH2-203ENST00000447098 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
PTCH2-203ENST00000447098 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
PTCH2-203ENST00000447098 CYP7A1P22680 504 aa13.16□□□□□ -0.3
PTCH2-203ENST00000447098 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
PTCH2-203ENST00000447098 KDRP35968 1356 aa13.16□□□□□ -0.3
PTCH2-203ENST00000447098 PDCP20941 246 aa13.16□□□□□ -0.3
PTCH2-203ENST00000447098 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
PTCH2-203ENST00000447098 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
PTCH2-203ENST00000447098 PDE8AO60658 829 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 BRF1Q92994 677 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 FEZ1Q99689 392 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 AK2P54819 239 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 TRPC5Q9UL62 973 aaPredicted RBP13.15□□□□□ -0.3
PTCH2-203ENST00000447098 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 XAGE2Q96GT9 111 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
PTCH2-203ENST00000447098 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
PTCH2-203ENST00000447098 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 ERICH4A6NGS2 130 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 GREM2Q9H772 168 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 HLFQ16534 295 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 MKNK2Q9HBH9 465 aa13.14□□□□□ -0.31
PTCH2-203ENST00000447098 LUZP1Q86V48 1076 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 AFF2P51816 1311 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 IGKV5-2P06315 115 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 PES1O00541 588 aaKnown RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 MPHOSPH10O00566 681 aaKnown RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
PTCH2-203ENST00000447098 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
PTCH2-203ENST00000447098 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 HSPA1LP34931 641 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 TYRO3Q06418 890 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
PTCH2-203ENST00000447098 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
PTCH2-203ENST00000447098 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 SNAP23O00161 211 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTCH2-203ENST00000447098 STK38Q15208 465 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
PTCH2-203ENST00000447098 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 RGS12O14924 1447 aa13.12□□□□□ -0.31
PTCH2-203ENST00000447098 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 ZAP70P43403 619 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTCH2-203ENST00000447098 V9GYY5 206 aaPredicted RBP13.11□□□□□ -0.31
PTCH2-203ENST00000447098 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
PTCH2-203ENST00000447098 ME1P48163 572 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 CTSWP56202 376 aa13.11□□□□□ -0.31
PTCH2-203ENST00000447098 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
PTCH2-203ENST00000447098 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
PTCH2-203ENST00000447098 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 ZNF165P49910 485 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
PTCH2-203ENST00000447098 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
PTCH2-203ENST00000447098 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
PTCH2-203ENST00000447098 DACT1Q9NYF0 836 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 REREQ9P2R6 1566 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 HSPA4P34932 840 aa13.1□□□□□ -0.31
PTCH2-203ENST00000447098 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
PTCH2-203ENST00000447098 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms