RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 CTAGE5O15320 804 aa19.15■□□□□ 0.66
HDAC11-214ENST00000446613 MCMDC2Q4G0Z9 681 aa19.15■□□□□ 0.66
HDAC11-214ENST00000446613 UTYO14607 1347 aa19.14■□□□□ 0.66
HDAC11-214ENST00000446613 ATP5JP18859 108 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 GOLGA8FQ08AF8 430 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 GOLGA8DPQ0D2H9 430 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 GCKRQ14397 625 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 PLEKHO1Q53GL0 409 aaPredicted RBP19.14■□□□□ 0.65
HDAC11-214ENST00000446613 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 FMR1NBQ8N0W7 255 aaPredicted RBP19.14■□□□□ 0.65
HDAC11-214ENST00000446613 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 CLIC4Q9Y696 253 aa19.14■□□□□ 0.65
HDAC11-214ENST00000446613 PTPN12Q05209 780 aaKnown RBP19.14■□□□□ 0.65
HDAC11-214ENST00000446613 U3KPZ7 1027 aaPredicted RBP19.14■□□□□ 0.65
HDAC11-214ENST00000446613 ATP5J2-PTCD1G3V325 749 aa19.13■□□□□ 0.65
HDAC11-214ENST00000446613 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
HDAC11-214ENST00000446613 TTLL5Q6EMB2 1281 aa19.13■□□□□ 0.65
HDAC11-214ENST00000446613 DHX32Q7L7V1 743 aaKnown RBP19.13■□□□□ 0.65
HDAC11-214ENST00000446613 UBE3BQ7Z3V4 1068 aa19.13■□□□□ 0.65
HDAC11-214ENST00000446613 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC11-214ENST00000446613 NAA16Q6N069 864 aaPredicted RBP19.13■□□□□ 0.65
HDAC11-214ENST00000446613 GOLIM4O00461 696 aa19.12■□□□□ 0.65
HDAC11-214ENST00000446613 FDPSP14324 419 aaKnown RBP19.12■□□□□ 0.65
HDAC11-214ENST00000446613 LMOD1P29536 600 aaPredicted RBP19.12■□□□□ 0.65
HDAC11-214ENST00000446613 FAM53CQ9NYF3 392 aa19.12■□□□□ 0.65
HDAC11-214ENST00000446613 DDX58O95786 925 aaKnown RBP19.12■□□□□ 0.65
HDAC11-214ENST00000446613 ATP1A3P13637 1013 aa19.12■□□□□ 0.65
HDAC11-214ENST00000446613 TRERF1Q96PN7 1200 aa19.12■□□□□ 0.65
HDAC11-214ENST00000446613 EPC1Q9H2F5 836 aa19.12■□□□□ 0.65
HDAC11-214ENST00000446613 FANCGO15287 622 aa19.11■□□□□ 0.65
HDAC11-214ENST00000446613 CLCN6P51797 869 aa19.11■□□□□ 0.65
HDAC11-214ENST00000446613 MRPS27Q92552 414 aaKnown RBP19.11■□□□□ 0.65
HDAC11-214ENST00000446613 NEDD4P46934 1319 aa19.11■□□□□ 0.65
HDAC11-214ENST00000446613 RFX5P48382 616 aaPredicted RBP19.11■□□□□ 0.65
HDAC11-214ENST00000446613 HDAC5Q9UQL6 1122 aa19.11■□□□□ 0.65
HDAC11-214ENST00000446613 PDIA3P30101 505 aaKnown RBP19.11■□□□□ 0.65
HDAC11-214ENST00000446613 NEUROD6Q96NK8 337 aa19.11■□□□□ 0.65
HDAC11-214ENST00000446613 ARHGAP29Q52LW3 1261 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 LMOD2Q6P5Q4 547 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-214ENST00000446613 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-214ENST00000446613 SFPQP23246 707 aaKnown RBP eCLIP19.1■□□□□ 0.65
HDAC11-214ENST00000446613 TIMM10P62072 90 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 NEXNQ0ZGT2 675 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-214ENST00000446613 HOMER1Q86YM7 354 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 ZNF396Q96N95 335 aaPredicted RBP19.1■□□□□ 0.65
HDAC11-214ENST00000446613 CHMP4AQ9BY43 222 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 KIAA1468Q9P260 1216 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 FHOD1Q9Y613 1164 aa19.1■□□□□ 0.65
HDAC11-214ENST00000446613 CARMIL3Q8ND23 1372 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 HEG1Q9ULI3 1381 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 E7EWF7 191 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 SF3A1Q15459 793 aaKnown RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 ZBTB9Q96C00 473 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 LLPHQ9BRT6 129 aaKnown RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 TMEM51Q9NW97 253 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 DNAI1Q9UI46 699 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 PHF8Q9UPP1 1060 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 LAMA4Q16363 1823 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 H2AFXP16104 143 aaPredicted RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 HAND2P61296 217 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 EXOSC10Q01780 885 aaKnown RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 FAM177A1Q8N128 213 aaPredicted RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 NAT10Q9H0A0 1025 aaKnown RBP19.09■□□□□ 0.65
HDAC11-214ENST00000446613 TMX1Q9H3N1 280 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 L2HGDHQ9H9P8 463 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 MYH15Q9Y2K3 1946 aa19.09■□□□□ 0.65
HDAC11-214ENST00000446613 GSDMDP57764 484 aa19.08■□□□□ 0.65
HDAC11-214ENST00000446613 HAUS7Q99871 368 aa19.08■□□□□ 0.65
HDAC11-214ENST00000446613 HSP90AA4PQ58FG1 418 aa19.08■□□□□ 0.64
HDAC11-214ENST00000446613 DPF2Q92785 391 aa19.08■□□□□ 0.64
HDAC11-214ENST00000446613 COPRSQ9NQ92 184 aa19.08■□□□□ 0.64
HDAC11-214ENST00000446613 STK38Q15208 465 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 LINC00301Q8NCQ3 95 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 VGLL3A8MV65 326 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 SEC31AO94979 1220 aaKnown RBP19.07■□□□□ 0.64
HDAC11-214ENST00000446613 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
HDAC11-214ENST00000446613 NCAPHQ15003 741 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 ZRSR1Q15695 479 aaKnown RBP19.07■□□□□ 0.64
HDAC11-214ENST00000446613 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 ADALQ6DHV7 355 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 KBTBD3Q8NAB2 608 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
HDAC11-214ENST00000446613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.07■□□□□ 0.64
HDAC11-214ENST00000446613 HSPD1P10809 573 aaKnown RBP19.07■□□□□ 0.64
HDAC11-214ENST00000446613 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
HDAC11-214ENST00000446613 MARCKSP29966 332 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-214ENST00000446613 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
HDAC11-214ENST00000446613 SLIT1O75093 1534 aa19.06■□□□□ 0.64
HDAC11-214ENST00000446613 POLR3GO15318 223 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-214ENST00000446613 PNMA6AP0CW24 399 aaPredicted RBP19.06■□□□□ 0.64
HDAC11-214ENST00000446613 PLA2G4AP47712 749 aa19.06■□□□□ 0.64
HDAC11-214ENST00000446613 PSME1Q06323 249 aa19.06■□□□□ 0.64
HDAC11-214ENST00000446613 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
HDAC11-214ENST00000446613 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
HDAC11-214ENST00000446613 ESCO1Q5FWF5 840 aa19.05■□□□□ 0.64
HDAC11-214ENST00000446613 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms