RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 PRPF40BQ6NWY9 871 aaKnown RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 TMEM102Q8N9M5 508 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 NXPE3Q969Y0 559 aa7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
HMGB1P48-201ENST00000446155 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 AFF1P51825 1210 aaKnown RBP7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 FGD1P98174 961 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 NUDT8Q8WV74 236 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 ENAMQ9NRM1 1142 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 TRIM33Q9UPN9 1127 aa7.53□□□□□ -1.2
HMGB1P48-201ENST00000446155 PDE2AO00408 941 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 NID1P14543 1247 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 GNA15P30679 374 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 BAG6P46379 1132 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 GRM2Q14416 872 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 ADAM19Q9H013 955 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
HMGB1P48-201ENST00000446155 LILRB5O75023 590 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 SMNDC1O75940 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 AMPD1P23109 780 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 DAB2P98082 770 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 NEDD1Q8NHV4 660 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 FRMD6Q96NE9 622 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 LIN7BQ9HAP6 207 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 PARP2Q9UGN5 583 aa7.51□□□□□ -1.21
HMGB1P48-201ENST00000446155 GIPC1O14908 333 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 GRIA4P48058 902 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 CEP135Q66GS9 1140 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 TMC4Q7Z404 712 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 SOX13Q9UN79 622 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 ADAMTS8Q9UP79 889 aa7.5□□□□□ -1.21
HMGB1P48-201ENST00000446155 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 ITPKAP23677 461 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 NXPE4Q6UWF7 544 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 EHD4Q9H223 541 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 TRAK1Q9UPV9 953 aa7.49□□□□□ -1.21
HMGB1P48-201ENST00000446155 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 PTPRAP18433 802 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 MRPL58Q14197 206 aaKnown RBP7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 C12orf49Q9H741 205 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 SPG7Q9UQ90 795 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 AK5Q9Y6K8 562 aa7.48□□□□□ -1.21
HMGB1P48-201ENST00000446155 UNCXA6NJT0 531 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 TM4SF5O14894 197 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 PTPN12Q05209 780 aaKnown RBP7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 MSL1Q68DK7 614 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 GDF6Q6KF10 455 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 VN1R5Q7Z5H4 357 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 BSNDQ8WZ55 320 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 FAM161BQ96MY7 647 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 LACRTQ9GZZ8 138 aa7.47□□□□□ -1.21
HMGB1P48-201ENST00000446155 A0A096LPE4 126 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 A0A1W2PPZ6 126 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 EPHA1P21709 976 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 CDC27P30260 824 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 ANKRD24Q8TF21 1146 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 MUC3BQ9H195 1237 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 RRAGCQ9HB90 399 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 SH2B1Q9NRF2 756 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 MKL2Q9ULH7 1088 aa7.46□□□□□ -1.22
HMGB1P48-201ENST00000446155 GNB5O14775 395 aa7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 CTSHP09668 335 aa7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 PSMD2Q13200 908 aa7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 IL22RA1Q8N6P7 574 aa7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 KIAA1522Q9P206 1035 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
HMGB1P48-201ENST00000446155 XRCC5P13010 732 aaKnown RBP7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 EIF4BP23588 611 aaKnown RBP7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 VAMP1P23763 118 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 LDLRAD1Q5T700 205 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 ASAP3Q8TDY4 903 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 ZNF428Q96B54 188 aa7.44□□□□□ -1.22
HMGB1P48-201ENST00000446155 STK17AQ9UEE5 414 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms