RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 RASSF10A6NK89 507 aa23.77■■□□□ 1.4
COMMD1-204ENST00000445644 DLK2Q6UY11 383 aa23.77■■□□□ 1.4
COMMD1-204ENST00000445644 MXD3Q9BW11 206 aa23.77■■□□□ 1.4
COMMD1-204ENST00000445644 USP17L3A6NCW0 530 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 USP17L4A6NCW7 530 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 VEGFBP49765 207 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 CCDC57Q2TAC2 916 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 USP17L1Q7RTZ2 530 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 ANKRD44Q8N8A2 993 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 AGBL3Q8NEM8 1001 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 COA1Q9GZY4 146 aa23.76■■□□□ 1.39
COMMD1-204ENST00000445644 BICC1Q9H694 974 aaKnown RBP23.76■■□□□ 1.39
COMMD1-204ENST00000445644 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-204ENST00000445644 ZNF280AP59817 542 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-204ENST00000445644 KIF4BQ2VIQ3 1234 aa23.75■■□□□ 1.39
COMMD1-204ENST00000445644 RABL6Q3YEC7 729 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-204ENST00000445644 DACT2Q5SW24 774 aa23.75■■□□□ 1.39
COMMD1-204ENST00000445644 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
COMMD1-204ENST00000445644 ASTN2O75129 1339 aaPredicted RBP23.75■■□□□ 1.39
COMMD1-204ENST00000445644 HSPA1AP0DMV8 641 aaKnown RBP23.74■■□□□ 1.39
COMMD1-204ENST00000445644 HSPA1BP0DMV9 641 aaKnown RBP23.74■■□□□ 1.39
COMMD1-204ENST00000445644 USP44Q9H0E7 712 aa23.74■■□□□ 1.39
COMMD1-204ENST00000445644 DEFB115Q30KQ5 88 aa23.73■■□□□ 1.39
COMMD1-204ENST00000445644 LDHAL6AQ6ZMR3 332 aa23.73■■□□□ 1.39
COMMD1-204ENST00000445644 CDC37L1Q7L3B6 337 aa23.73■■□□□ 1.39
COMMD1-204ENST00000445644 PUS3Q9BZE2 481 aaKnown RBP23.73■■□□□ 1.39
COMMD1-204ENST00000445644 ABT1Q9ULW3 272 aaKnown RBP23.73■■□□□ 1.39
COMMD1-204ENST00000445644 BRPF1P55201 1214 aaPredicted RBP23.72■■□□□ 1.39
COMMD1-204ENST00000445644 C15orf52Q6ZUT6 534 aaKnown RBP23.72■■□□□ 1.39
COMMD1-204ENST00000445644 USP48Q86UV5 1035 aa23.72■■□□□ 1.39
COMMD1-204ENST00000445644 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
COMMD1-204ENST00000445644 TLL2Q9Y6L7 1015 aa23.72■■□□□ 1.39
COMMD1-204ENST00000445644 CELF2O95319 508 aaKnown RBP23.71■■□□□ 1.39
COMMD1-204ENST00000445644 KCNJ4P48050 445 aa23.71■■□□□ 1.39
COMMD1-204ENST00000445644 RARSP54136 660 aaKnown RBP23.71■■□□□ 1.39
COMMD1-204ENST00000445644 TAF7LQ5H9L4 462 aa23.71■■□□□ 1.39
COMMD1-204ENST00000445644 STRIP1Q5VSL9 837 aa23.71■■□□□ 1.39
COMMD1-204ENST00000445644 ARAP2Q8WZ64 1704 aa23.7■■□□□ 1.39
COMMD1-204ENST00000445644 ADM5C9JUS6 153 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 USP17L8P0C7I0 530 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 CD209Q9NNX6 404 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 MYOZ2Q9NPC6 264 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 CNNM1Q9NRU3 951 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 ECM29Q5VYK3 1845 aa23.7■■□□□ 1.38
COMMD1-204ENST00000445644 FBXW7Q969H0 707 aa23.69■■□□□ 1.38
COMMD1-204ENST00000445644 GGA3Q9NZ52 723 aa23.69■■□□□ 1.38
COMMD1-204ENST00000445644 WDR33Q9C0J8 1336 aaKnown RBP23.68■■□□□ 1.38
COMMD1-204ENST00000445644 PLIN1O60240 522 aa23.68■■□□□ 1.38
COMMD1-204ENST00000445644 KRT26Q7Z3Y9 468 aa23.68■■□□□ 1.38
COMMD1-204ENST00000445644 SAPCD2Q86UD0 394 aa23.68■■□□□ 1.38
COMMD1-204ENST00000445644 ZNF408Q9H9D4 720 aa23.68■■□□□ 1.38
COMMD1-204ENST00000445644 RIPOR2Q9Y4F9 1068 aa23.68■■□□□ 1.38
COMMD1-204ENST00000445644 GTF2IP78347 998 aa23.67■■□□□ 1.38
COMMD1-204ENST00000445644 SCARF1Q14162 830 aa23.67■■□□□ 1.38
COMMD1-204ENST00000445644 LRRC24Q50LG9 513 aa23.67■■□□□ 1.38
COMMD1-204ENST00000445644 TTLL5Q6EMB2 1281 aa23.67■■□□□ 1.38
COMMD1-204ENST00000445644 CYP4F22Q6NT55 531 aa23.67■■□□□ 1.38
COMMD1-204ENST00000445644 MYO3BQ8WXR4 1341 aa23.66■■□□□ 1.38
COMMD1-204ENST00000445644 IL1R1P14778 569 aa23.66■■□□□ 1.38
COMMD1-204ENST00000445644 KLHDC4Q8TBB5 520 aa23.66■■□□□ 1.38
COMMD1-204ENST00000445644 DCPSQ96C86 337 aaKnown RBP23.66■■□□□ 1.38
COMMD1-204ENST00000445644 ANGEL2Q5VTE6 544 aaKnown RBP23.65■■□□□ 1.38
COMMD1-204ENST00000445644 CERS5Q8N5B7 392 aa23.65■■□□□ 1.38
COMMD1-204ENST00000445644 RFX5P48382 616 aaPredicted RBP23.64■■□□□ 1.37
COMMD1-204ENST00000445644 NBPF9Q3BBW0 867 aa23.64■■□□□ 1.37
COMMD1-204ENST00000445644 COL13A1Q5TAT6 717 aaPredicted RBP23.64■■□□□ 1.37
COMMD1-204ENST00000445644 CAPNS2Q96L46 248 aa23.64■■□□□ 1.37
COMMD1-204ENST00000445644 SCAF8Q9UPN6 1271 aaKnown RBP23.64■■□□□ 1.37
COMMD1-204ENST00000445644 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
COMMD1-204ENST00000445644 ZNF804AQ7Z570 1209 aa23.63■■□□□ 1.37
COMMD1-204ENST00000445644 VGLL2Q8N8G2 317 aa23.63■■□□□ 1.37
COMMD1-204ENST00000445644 API5Q9BZZ5 524 aaKnown RBP23.63■■□□□ 1.37
COMMD1-204ENST00000445644 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
COMMD1-204ENST00000445644 FOXN1O15353 648 aa23.62■■□□□ 1.37
COMMD1-204ENST00000445644 UBE4AQ14139 1066 aa23.62■■□□□ 1.37
COMMD1-204ENST00000445644 KIAA0825Q8IV33 1275 aa23.62■■□□□ 1.37
COMMD1-204ENST00000445644 MROH5Q6ZUA9 1318 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 PITPNM2Q9BZ72 1349 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 MYH13Q9UKX3 1938 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 WNT10BO00744 389 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 CDCA5Q96FF9 252 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 HHIPL1Q96JK4 782 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 WBP1LQ9NX94 342 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 JAG2Q9Y219 1238 aa23.61■■□□□ 1.37
COMMD1-204ENST00000445644 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 BCAR3O75815 825 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 SASH1O94885 1247 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 GYG1P46976 350 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 PAXIP1Q6ZW49 1069 aaPredicted RBP23.6■■□□□ 1.37
COMMD1-204ENST00000445644 SULF1Q8IWU6 871 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 ARHGAP45Q92619 1136 aa23.6■■□□□ 1.37
COMMD1-204ENST00000445644 ZBED3Q96IU2 234 aaPredicted RBP23.6■■□□□ 1.37
COMMD1-204ENST00000445644 FAM84BQ96KN1 310 aaPredicted RBP23.6■■□□□ 1.37
COMMD1-204ENST00000445644 AOC2O75106 756 aa23.59■■□□□ 1.37
COMMD1-204ENST00000445644 PTPN12Q05209 780 aaKnown RBP23.59■■□□□ 1.37
COMMD1-204ENST00000445644 GRM1Q13255 1194 aa23.59■■□□□ 1.37
COMMD1-204ENST00000445644 OGFOD1Q8N543 542 aa23.59■■□□□ 1.37
COMMD1-204ENST00000445644 MEIS3Q99687 375 aa23.59■■□□□ 1.37
COMMD1-204ENST00000445644 PAPPA2Q9BXP8 1791 aa23.59■■□□□ 1.37
COMMD1-204ENST00000445644 UBTFL1P0CB47 393 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms