RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 DCAF11Q8TEB1 546 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 SH3TC1Q8TE82 1336 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 YDJCA8MPS7 323 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 BBOX1O75936 387 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 OLFM4Q6UX06 510 aa9.07□□□□□ -0.96
BRAFP1-201ENST00000445336 COL4A1P02462 1669 aa9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 PSMD14O00487 310 aa9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 OSBPP22059 807 aa9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 TTLL12Q14166 644 aaPredicted RBP9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 RPGRQ92834 1020 aaKnown RBP9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 PTCD1O75127 700 aaKnown RBP9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 GRIN2CQ14957 1233 aa9.06□□□□□ -0.96
BRAFP1-201ENST00000445336 KMT2EQ8IZD2 1858 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 C17orf99Q6UX52 265 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 DLK2Q6UY11 383 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 RAD17O75943 681 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
BRAFP1-201ENST00000445336 POTEB3A0JP26 581 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 POTEBQ6S5H4 581 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 PTPN18Q99952 460 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 ZNF576Q9H609 170 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 OTOFQ9HC10 1997 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 FCGRTP55899 365 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 PRSS33Q8NF86 280 aa9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 SPTBN5Q9NRC6 3674 aaKnown RBP9.04□□□□□ -0.96
BRAFP1-201ENST00000445336 FAM86C2PA6NEL3 165 aa9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 SYN1P17600 705 aa9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 POTEEQ6S8J3 1075 aa9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 SHTN1A0MZ66 631 aa9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 NECAB3Q96P71 396 aaPredicted RBP9.03□□□□□ -0.96
BRAFP1-201ENST00000445336 MOB2Q70IA6 237 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 DEFB118Q96PH6 123 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 EYA3Q99504 573 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 TCF20Q9UGU0 1960 aaKnown RBP9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 ZNF318Q5VUA4 2279 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 INHAP05111 366 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 PUM1Q14671 1186 aaKnown RBP eCLIP9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 SHHQ15465 462 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 ANKRD13AQ8IZ07 590 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 GMLQ99445 158 aa9.02□□□□□ -0.97
BRAFP1-201ENST00000445336 GAKO14976 1311 aa9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 ITGAEP38570 1179 aa9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 BIN2Q9UBW5 565 aaPredicted RBP9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 EGFRP00533 1210 aa9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 TIFAQ96CG3 184 aa9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 FRMPD3Q5JV73 1810 aa9.01□□□□□ -0.97
BRAFP1-201ENST00000445336 MYO3BQ8WXR4 1341 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 PSMC4P43686 418 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 MCTP2Q6DN12 878 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 DGLUCYQ7Z3D6 616 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 SLC52A2Q9HAB3 445 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 RTL9Q8NET4 1388 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 MED19A0JLT2 244 aaPredicted RBP9□□□□□ -0.97
BRAFP1-201ENST00000445336 DCXO43602 365 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 ADCY3O60266 1144 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 MTHFSP49914 203 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
BRAFP1-201ENST00000445336 MYOZ2Q9NPC6 264 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 ANGEL1Q9UNK9 670 aaKnown RBP9□□□□□ -0.97
BRAFP1-201ENST00000445336 SZT2Q5T011 3432 aa9□□□□□ -0.97
BRAFP1-201ENST00000445336 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 CETPP11597 493 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 SDHBP21912 280 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 RAB30Q15771 203 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 SUPT20HL1Q3ZLR7 823 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 NCOR1O75376 2440 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 DNAJB2P25686 324 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 NBL1P41271 181 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 HSP90AB2PQ58FF8 381 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 DIS3LQ8TF46 1054 aaKnown RBP8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 JAG2Q9Y219 1238 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 PFASO15067 1338 aa8.99□□□□□ -0.97
BRAFP1-201ENST00000445336 C1orf141Q5JVX7 400 aa8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 BRI3BPQ8WY22 251 aa8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 U2AF1L5P0DN76 240 aaPredicted RBP8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 U2AF1Q01081 240 aaKnown RBP eCLIP8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 ANKRD23Q86SG2 305 aa8.98□□□□□ -0.97
BRAFP1-201ENST00000445336 ZNF804BA4D1E1 1349 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms