RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 USP17L1Q7RTZ2 530 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 SAMD7Q7Z3H4 446 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 ANKRD44Q8N8A2 993 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 CNNM1Q9NRU3 951 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 KIF16BQ96L93 1317 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 IRS2Q9Y4H2 1338 aa21.7■■□□□ 1.06
SLC4A3-208ENST00000444906 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
SLC4A3-208ENST00000444906 TAF5LO75529 589 aa21.69■■□□□ 1.06
SLC4A3-208ENST00000444906 C15orf52Q6ZUT6 534 aaKnown RBP21.69■■□□□ 1.06
SLC4A3-208ENST00000444906 HELBQ8NG08 1087 aaPredicted RBP21.69■■□□□ 1.06
SLC4A3-208ENST00000444906 GMLQ99445 158 aa21.69■■□□□ 1.06
SLC4A3-208ENST00000444906 EGFRP00533 1210 aa21.68■■□□□ 1.06
SLC4A3-208ENST00000444906 TBC1D10BQ4KMP7 808 aaPredicted RBP21.68■■□□□ 1.06
SLC4A3-208ENST00000444906 CNTNAP1P78357 1384 aa21.68■■□□□ 1.06
SLC4A3-208ENST00000444906 SNAP23O00161 211 aa21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 TRAF5O00463 557 aa21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 ZNF280AP59817 542 aaPredicted RBP21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 FMR1Q06787 632 aaKnown RBP eCLIP21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 DACT2Q5SW24 774 aa21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 ARHGAP45Q92619 1136 aa21.67■■□□□ 1.06
SLC4A3-208ENST00000444906 KIF4BQ2VIQ3 1234 aa21.66■■□□□ 1.06
SLC4A3-208ENST00000444906 STRIP1Q5VSL9 837 aa21.66■■□□□ 1.06
SLC4A3-208ENST00000444906 GLIS2Q9BZE0 524 aaPredicted RBP21.66■■□□□ 1.06
SLC4A3-208ENST00000444906 MKRN1Q9UHC7 482 aaKnown RBP21.66■■□□□ 1.06
SLC4A3-208ENST00000444906 MYO3BQ8WXR4 1341 aa21.65■■□□□ 1.06
SLC4A3-208ENST00000444906 CDC37L1Q7L3B6 337 aa21.65■■□□□ 1.06
SLC4A3-208ENST00000444906 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
SLC4A3-208ENST00000444906 CD209Q9NNX6 404 aa21.65■■□□□ 1.06
SLC4A3-208ENST00000444906 ZBED9Q6R2W3 1325 aa21.64■■□□□ 1.05
SLC4A3-208ENST00000444906 USP17L8P0C7I0 530 aa21.64■■□□□ 1.05
SLC4A3-208ENST00000444906 RBM26Q5T8P6 1007 aaKnown RBP21.64■■□□□ 1.05
SLC4A3-208ENST00000444906 RIPOR2Q9Y4F9 1068 aa21.64■■□□□ 1.05
SLC4A3-208ENST00000444906 MROH5Q6ZUA9 1318 aa21.63■■□□□ 1.05
SLC4A3-208ENST00000444906 RASSF10A6NK89 507 aa21.63■■□□□ 1.05
SLC4A3-208ENST00000444906 PLIN1O60240 522 aa21.63■■□□□ 1.05
SLC4A3-208ENST00000444906 CST9Q5W186 159 aa21.63■■□□□ 1.05
SLC4A3-208ENST00000444906 UBTFL1P0CB47 393 aaPredicted RBP21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 UBE4AQ14139 1066 aa21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 TTLL5Q6EMB2 1281 aa21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 ZNF804AQ7Z570 1209 aa21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 FBXW7Q969H0 707 aa21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 MXD3Q9BW11 206 aa21.62■■□□□ 1.05
SLC4A3-208ENST00000444906 IPO8O15397 1037 aaKnown RBP21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 IL1R1P14778 569 aa21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 MYOZ2Q9NPC6 264 aa21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 ABT1Q9ULW3 272 aaKnown RBP21.61■■□□□ 1.05
SLC4A3-208ENST00000444906 BCAR3O75815 825 aa21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 RFX5P48382 616 aaPredicted RBP21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 GTF2IP78347 998 aa21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 USP48Q86UV5 1035 aa21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 DCPSQ96C86 337 aaKnown RBP21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 GGA3Q9NZ52 723 aa21.6■■□□□ 1.05
SLC4A3-208ENST00000444906 THSD7BQ9C0I4 1608 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 TRIM27P14373 513 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 MMP14P50281 582 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 DEFB115Q30KQ5 88 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 ATF7IPQ6VMQ6 1270 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 KRT26Q7Z3Y9 468 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 KLHDC4Q8TBB5 520 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 ARAP2Q8WZ64 1704 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 MEIS3Q99687 375 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 HDAC5Q9UQL6 1122 aa21.59■■□□□ 1.05
SLC4A3-208ENST00000444906 ASTN2O75129 1339 aaPredicted RBP21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 PCNTO95613 3336 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 VEGFBP49765 207 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 METTL24Q5JXM2 366 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 VGLL2Q8N8G2 317 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 TLL2Q9Y6L7 1015 aa21.58■■□□□ 1.05
SLC4A3-208ENST00000444906 PTPN12Q05209 780 aaKnown RBP21.57■■□□□ 1.04
SLC4A3-208ENST00000444906 SCARF1Q14162 830 aa21.57■■□□□ 1.04
SLC4A3-208ENST00000444906 LRRFIP2Q9Y608 721 aaKnown RBP21.57■■□□□ 1.04
SLC4A3-208ENST00000444906 PITPNM2Q9BZ72 1349 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 ADM5C9JUS6 153 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 PDE8BO95263 885 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 FKBP1AP62942 108 aaKnown RBP21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 ANGEL2Q5VTE6 544 aaKnown RBP21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 KIAA0825Q8IV33 1275 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 SULF1Q8IWU6 871 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 ZNF408Q9H9D4 720 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 ECM29Q5VYK3 1845 aa21.56■■□□□ 1.04
SLC4A3-208ENST00000444906 EYA2O00167 538 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 HSPA1AP0DMV8 641 aaKnown RBP21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 HSPA1BP0DMV9 641 aaKnown RBP21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 HIBADHP31937 336 aaKnown RBP21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 DLK2Q6UY11 383 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 SAPCD2Q86UD0 394 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 CERS5Q8N5B7 392 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 TDRD7Q8NHU6 1098 aaKnown RBP21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 FAM84BQ96KN1 310 aaPredicted RBP21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 HDAC9Q9UKV0 1011 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 FAM205AQ6ZU69 1335 aa21.55■■□□□ 1.04
SLC4A3-208ENST00000444906 GNAI3P08754 354 aa21.54■■□□□ 1.04
SLC4A3-208ENST00000444906 GYG1P46976 350 aa21.54■■□□□ 1.04
SLC4A3-208ENST00000444906 FBXO3Q9UK99 471 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms