RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DOCK2Q92608 1830 aa18.71■□□□□ 0.59
SNX13-204ENST00000444712 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
SNX13-204ENST00000444712 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
SNX13-204ENST00000444712 ZAP70P43403 619 aa18.71■□□□□ 0.59
SNX13-204ENST00000444712 CCDC129Q6ZRS4 1044 aa18.71■□□□□ 0.59
SNX13-204ENST00000444712 MAST3O60307 1309 aa18.7■□□□□ 0.58
SNX13-204ENST00000444712 GNPATO15228 680 aa18.7■□□□□ 0.58
SNX13-204ENST00000444712 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
SNX13-204ENST00000444712 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
SNX13-204ENST00000444712 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
SNX13-204ENST00000444712 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
SNX13-204ENST00000444712 APPBP2Q92624 585 aa18.7■□□□□ 0.58
SNX13-204ENST00000444712 MCAMP43121 646 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 CCDC102BQ68D86 513 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 BRD1O95696 1058 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
SNX13-204ENST00000444712 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 NEK1Q96PY6 1258 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 BCL11BQ9C0K0 894 aaPredicted RBP18.69■□□□□ 0.58
SNX13-204ENST00000444712 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
SNX13-204ENST00000444712 WDR33Q9C0J8 1336 aaKnown RBP18.69■□□□□ 0.58
SNX13-204ENST00000444712 CPA1P15085 419 aa18.68■□□□□ 0.58
SNX13-204ENST00000444712 SCARF1Q14162 830 aa18.68■□□□□ 0.58
SNX13-204ENST00000444712 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SNX13-204ENST00000444712 SEC31BQ9NQW1 1179 aa18.68■□□□□ 0.58
SNX13-204ENST00000444712 HSPD1P10809 573 aaKnown RBP18.67■□□□□ 0.58
SNX13-204ENST00000444712 WASHC4Q2M389 1173 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 SMC3Q9UQE7 1217 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 CYP21A2P08686 494 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
SNX13-204ENST00000444712 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
SNX13-204ENST00000444712 KCNQ4P56696 695 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 PKP1Q13835 747 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 M0R2C6 588 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 CHGBP05060 677 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 ADRA2BP18089 450 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 PHKA1P46020 1223 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
SNX13-204ENST00000444712 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
SNX13-204ENST00000444712 BRWD3Q6RI45 1802 aa18.65■□□□□ 0.58
SNX13-204ENST00000444712 UBE3CQ15386 1083 aa18.65■□□□□ 0.58
SNX13-204ENST00000444712 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
SNX13-204ENST00000444712 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
SNX13-204ENST00000444712 ADD2P35612 726 aa18.64■□□□□ 0.58
SNX13-204ENST00000444712 CHRNDQ07001 517 aa18.64■□□□□ 0.58
SNX13-204ENST00000444712 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.58
SNX13-204ENST00000444712 HELBQ8NG08 1087 aaPredicted RBP18.64■□□□□ 0.58
SNX13-204ENST00000444712 BSDC1Q9NW68 430 aaPredicted RBP18.64■□□□□ 0.58
SNX13-204ENST00000444712 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
SNX13-204ENST00000444712 MCTP1Q6DN14 999 aa18.64■□□□□ 0.57
SNX13-204ENST00000444712 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
SNX13-204ENST00000444712 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
SNX13-204ENST00000444712 RFC4P35249 363 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 ME3Q16798 604 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 CCDC83Q8IWF9 413 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
SNX13-204ENST00000444712 ARHGEF1Q92888 912 aaKnown RBP18.63■□□□□ 0.57
SNX13-204ENST00000444712 UBE4AQ14139 1066 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
SNX13-204ENST00000444712 PI16Q6UXB8 463 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 TPCN1Q9ULQ1 816 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 LARGE1O95461 756 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 TOB2Q14106 344 aaPredicted RBP18.62■□□□□ 0.57
SNX13-204ENST00000444712 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 DHX32Q7L7V1 743 aaKnown RBP18.62■□□□□ 0.57
SNX13-204ENST00000444712 CHMP4CQ96CF2 233 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
SNX13-204ENST00000444712 ATP6V1DQ9Y5K8 247 aa18.62■□□□□ 0.57
SNX13-204ENST00000444712 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 GPAA1O43292 621 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 GNL3LQ9NVN8 582 aaKnown RBP18.61■□□□□ 0.57
SNX13-204ENST00000444712 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
SNX13-204ENST00000444712 TAF6LQ9Y6J9 622 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 MYH13Q9UKX3 1938 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 TAF1P21675 1872 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 IDH1O75874 414 aaKnown RBP18.61■□□□□ 0.57
SNX13-204ENST00000444712 SLFNL1Q499Z3 407 aa18.61■□□□□ 0.57
SNX13-204ENST00000444712 PIH1D3Q9NQM4 214 aaKnown RBP18.61■□□□□ 0.57
SNX13-204ENST00000444712 STX6O43752 255 aa18.6■□□□□ 0.57
SNX13-204ENST00000444712 PDCP20941 246 aa18.6■□□□□ 0.57
SNX13-204ENST00000444712 L1TD1Q5T7N2 865 aaKnown RBP18.6■□□□□ 0.57
SNX13-204ENST00000444712 LARP6Q9BRS8 491 aaKnown RBP18.6■□□□□ 0.57
SNX13-204ENST00000444712 PUS7LQ9H0K6 701 aaKnown RBP18.6■□□□□ 0.57
SNX13-204ENST00000444712 E7EWF7 191 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 PDE6AP16499 860 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 GJB2P29033 226 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 FGD1P98174 961 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 RASGRF1Q13972 1273 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 Q6ZUG5 572 aa18.59■□□□□ 0.57
SNX13-204ENST00000444712 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms