RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 SGSM2O43147 1006 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 SCARF1Q14162 830 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 ZNF512BQ96KM6 892 aaPredicted RBP11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
SMPD4P1-203ENST00000443839 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 PDE6BP35913 854 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 ANKIB1Q9P2G1 1089 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 ARID4AP29374 1257 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 HOXA10P31260 410 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 MCAMP43121 646 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 NMIQ13287 307 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 PI16Q6UXB8 463 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 FAM227BQ96M60 508 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 IL25Q9H293 177 aa11.48□□□□□ -0.57
SMPD4P1-203ENST00000443839 BBOX1O75936 387 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 ZAP70P43403 619 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 BCAMP50895 628 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 CAVIN4Q5BKX8 364 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 VPS37DQ86XT2 251 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 CRAMP1Q96RY5 1269 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 RAD50Q92878 1312 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 A0A0D9SFI3 127 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 WTIPA6NIX2 430 aaPredicted RBP11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 SRGNP10124 158 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 MCCP23508 829 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 GNL3LQ9NVN8 582 aaKnown RBP11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
SMPD4P1-203ENST00000443839 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 NPR1P16066 1061 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 GYG1P46976 350 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 TTF1Q15361 905 aaPredicted RBP11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 TICAM2Q86XR7 235 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 SPATA5Q8NB90 893 aa11.46□□□□□ -0.57
SMPD4P1-203ENST00000443839 XDHP47989 1333 aa11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 PPEF1O14829 653 aaPredicted RBP11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 TMC4Q7Z404 712 aa11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
SMPD4P1-203ENST00000443839 H0YIN7 160 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 RNF113AO15541 343 aaKnown RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 EPB41L2O43491 1005 aaKnown RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 CHGBP05060 677 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 CYP2E1P05181 493 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 SLC51AQ86UW1 340 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 LEMD3Q9Y2U8 911 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 COL11A2P13942 1736 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 FRAT2O75474 233 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 IDH1O75874 414 aaKnown RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 ZFYP08048 801 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 KLRK1P26718 216 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 GPSM2P81274 684 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
SMPD4P1-203ENST00000443839 MED23Q9ULK4 1368 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 CCDC171Q6TFL3 1326 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 UFL1O94874 794 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 HIBADHP31937 336 aaKnown RBP11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 BECN1Q14457 450 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 WASHC4Q2M389 1173 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 ZSCAN25Q6NSZ9 544 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 KIF2CQ99661 725 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 PIH1D3Q9NQM4 214 aaKnown RBP11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 HELLSQ9NRZ9 838 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 GGA1Q9UJY5 639 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 MYH7P12883 1935 aa11.43□□□□□ -0.58
SMPD4P1-203ENST00000443839 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 ZMYM1Q5SVZ6 1142 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 ATP6V0A2Q9Y487 856 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 SEMA3EO15041 775 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 ATP2B4P23634 1241 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 PTH1RQ03431 593 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
SMPD4P1-203ENST00000443839 SLC9C2Q5TAH2 1124 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms