RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MSH6P52701 1360 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 RESTQ13127 1097 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 NME9Q86XW9 330 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 BOLA2Q9H3K6 86 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6L7A0A1B0GV03 622 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 AMPHP49418 695 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CPLX3Q8WVH0 158 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 DACH1Q9UI36 760 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CAPN7Q9Y6W3 813 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CMA1P23946 247 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 CABS1Q96KC9 395 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 NEK1Q96PY6 1258 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 RNF216Q9NWF9 866 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 KIF21AQ7Z4S6 1674 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 MYL5Q02045 173 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 IFT140Q96RY7 1462 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CHRM1P11229 460 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 TRIM65Q6PJ69 517 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 LRRC2Q9BYS8 371 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GOLPH3LQ9H4A5 285 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 A0A1B0GVL5 298 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 N4BP1O75113 896 aaKnown RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 NEBLO76041 1014 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 ARHGAP25P42331 645 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 BEND6Q5SZJ8 279 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 FAM169AQ9Y6X4 670 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
HERC1-201ENST00000443617 SATB1Q01826 763 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 CCDC114Q96M63 670 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 FAM204AQ9H8W3 233 aa5.74□□□□□ -1.49
HERC1-201ENST00000443617 HNRNPH1P31943 449 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 KCNB2Q92953 911 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ERVK-7P63135 1459 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 MARCKSP29966 332 aaPredicted RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 Q6ZUG5 572 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 USP44Q9H0E7 712 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 EIF2AK4Q9P2K8 1649 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6BA6NDN3 693 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 SWT1Q5T5J6 900 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 SCLT1Q96NL6 688 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 SBNO2Q9Y2G9 1366 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 NAA25Q14CX7 972 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ANO1Q5XXA6 986 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 CD109Q6YHK3 1445 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 FAM227BQ96M60 508 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 PARP3Q9Y6F1 533 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ADGRL1O94910 1474 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ANKRD65E5RJM6 399 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 EZRP15311 586 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 TRIM29Q14134 588 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 SSH3Q8TE77 659 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ZNHIT6Q9NWK9 470 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 PRR29P0C7W0 189 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 CAPS2Q9BXY5 557 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ATP10BO94823 1461 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 SARNPP82979 210 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 SAFBQ15424 915 aaKnown RBP eCLIP5.73□□□□□ -1.498e-8■□□□□ 9.8
HERC1-201ENST00000443617 FMNL3Q8IVF7 1028 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 EHBP1Q8NDI1 1231 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 DHX58Q96C10 678 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 KIAA0232Q92628 1395 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 MAP2K7O14733 419 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ERCC3P19447 782 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 GUCY1B3Q02153 619 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 CASP8Q14790 479 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 HDGFL1Q5TGJ6 251 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 SUGP1Q8IWZ8 645 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 IGSF22Q8N9C0 903 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 HNRNPLLQ8WVV9 542 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 PRDM2Q13029 1718 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 NDUFA8P51970 172 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 RABEP2Q9H5N1 569 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 MED14O60244 1454 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 ADKP55263 362 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 DHX32Q7L7V1 743 aaKnown RBP5.73□□□□□ -1.49
HERC1-201ENST00000443617 RNF40O75150 1001 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 PPP2R5AQ15172 486 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 NBPF14Q5TI25 921 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 LRRC31Q6UY01 552 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 CEP170Q5SW79 1584 aa5.73□□□□□ -1.49
HERC1-201ENST00000443617 PFKFB2O60825 505 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 ADALQ6DHV7 355 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 CEP120Q8N960 986 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 ABCC10Q5T3U5 1492 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 TACO1Q9BSH4 297 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 URB2Q14146 1524 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 GOLGA6L10A6NI86 522 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 PES1O00541 588 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 YEATS4O95619 227 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 NAA15Q9BXJ9 866 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 AKAP2Q9Y2D5 859 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 CPLX2Q6PUV4 134 aaKnown RBP5.72□□□□□ -1.49
HERC1-201ENST00000443617 FTOQ9C0B1 505 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC1-201ENST00000443617 PANX2Q96RD6 677 aa5.72□□□□□ -1.49
HERC1-201ENST00000443617 PSEN1P49768 467 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms