RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ZNF609O15014 1411 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 EPHX2P34913 555 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ZNF804AQ7Z570 1209 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
HLA-DQB1-206ENST00000443574 YDJCA8MPS7 323 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 ECM29Q5VYK3 1845 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
HLA-DQB1-206ENST00000443574 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PLIN1O60240 522 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 TAF5LO75529 589 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 SCNN1DP51172 638 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 ADARB2Q9NS39 739 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
HLA-DQB1-206ENST00000443574 POTECB2RU33 542 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 H7C1D1 291 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 EYA2O00167 538 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PSMD14O00487 310 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 SRGAP3O43295 1099 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 MTX1Q13505 466 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 DPF2Q92785 391 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
HLA-DQB1-206ENST00000443574 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CIAO1O76071 339 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 VPS37DQ86XT2 251 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PUS3Q9BZE2 481 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 DDX19BQ9UMR2 479 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 RIPOR2Q9Y4F9 1068 aa12.86□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PDE8BO95263 885 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 IFIT1P09914 478 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 HSPA6P17066 643 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 IL15P40933 162 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CAVIN4Q5BKX8 364 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 STRIP1Q5VSL9 837 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 KLHDC4Q8TBB5 520 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 SIL1Q9H173 461 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 COPRSQ9NQ92 184 aa12.85□□□□□ -0.35
HLA-DQB1-206ENST00000443574 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 RLBP1P12271 317 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 SLC5A1P13866 664 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 EPS15P42566 896 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 MMP14P50281 582 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-206ENST00000443574 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 KLRK1P26718 216 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 APLP1P51693 650 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 PDE3AQ14432 1141 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 CD209Q9NNX6 404 aa12.83□□□□□ -0.36
HLA-DQB1-206ENST00000443574 POLR2AP24928 1970 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 WTIPA6NIX2 430 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 SNAP23O00161 211 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 IL1R1P14778 569 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 HIBADHP31937 336 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 GTF2IP78347 998 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 ZC3H15Q8WU90 426 aaKnown RBP12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 LPIN2Q92539 896 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
HLA-DQB1-206ENST00000443574 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-206ENST00000443574 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DQB1-206ENST00000443574 OS9Q13438 667 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-206ENST00000443574 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
HLA-DQB1-206ENST00000443574 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
HLA-DQB1-206ENST00000443574 C1orf115Q9H7X2 142 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms