RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 DCTN4Q9UJW0 460 aa8.12□□□□□ -1.11
AC003001.1-201ENST00000443247 TRPA1O75762 1119 aa8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 MAPK1P28482 360 aa8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 GATA4P43694 442 aa8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 GRIK4Q16099 956 aa8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 RBCK1Q9BYM8 510 aa8.11□□□□□ -1.11
AC003001.1-201ENST00000443247 IGHA2P01877 340 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 POLR3DP05423 398 aaPredicted RBP8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 EDN3P14138 238 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 ELNP15502 786 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 ORC1Q13415 861 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 LATS2Q9NRM7 1088 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 DZANK1Q9NVP4 752 aa8.1□□□□□ -1.11
AC003001.1-201ENST00000443247 C9orf172C9J069 976 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 TMC7Q7Z402 723 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 DTWD1Q8N5C7 304 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 POP1Q99575 1024 aaKnown RBP8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 OSMRQ99650 979 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 ZKSCAN3Q9BRR0 538 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 NIF3L1Q9GZT8 377 aa8.09□□□□□ -1.11
AC003001.1-201ENST00000443247 NFKBIEO00221 500 aa8.08□□□□□ -1.12
AC003001.1-201ENST00000443247 NEFLP07196 543 aa8.08□□□□□ -1.12
AC003001.1-201ENST00000443247 PTPRAP18433 802 aa8.08□□□□□ -1.12
AC003001.1-201ENST00000443247 CACTIN-AS1Q8N1I8 211 aa8.08□□□□□ -1.12
AC003001.1-201ENST00000443247 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
AC003001.1-201ENST00000443247 PDE2AO00408 941 aaPredicted RBP8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 CPNE3O75131 537 aaKnown RBP8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 CDC27P30260 824 aa8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 DOC2BQ14184 412 aa8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 PEAR1Q5VY43 1037 aaPredicted RBP8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
AC003001.1-201ENST00000443247 FAM177BA6PVY3 158 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 EIF1AYO14602 144 aaKnown RBP8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 SELPP16109 830 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 EPHA1P21709 976 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 CDC25BP30305 580 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 SHISA2Q6UWI4 295 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 TMEM102Q8N9M5 508 aaPredicted RBP8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 ALKBH8Q96BT7 664 aaKnown RBP8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 LENG1Q96BZ8 264 aaPredicted RBP8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
AC003001.1-201ENST00000443247 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
AC003001.1-201ENST00000443247 ADAM19Q9H013 955 aa8.05□□□□□ -1.12
AC003001.1-201ENST00000443247 MUC3BQ9H195 1237 aa8.05□□□□□ -1.12
AC003001.1-201ENST00000443247 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 NXPE3Q969Y0 559 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 CSRNP1Q96S65 589 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 SRA1Q9HD15 236 aaKnown RBP8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 NPHS2Q9NP85 383 aa8.04□□□□□ -1.12
AC003001.1-201ENST00000443247 A0A1W2PP55 124 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 SND1Q7KZF4 910 aaKnown RBP eCLIP8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 ASAP3Q8TDY4 903 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 BHLHE41Q9C0J9 482 aaPredicted RBP8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 DNAJC25Q9H1X3 360 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 USP21Q9UK80 565 aa8.03□□□□□ -1.12
AC003001.1-201ENST00000443247 H3BRJ5 948 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 DLL1O00548 723 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 TREHO43280 583 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 CABP4P57796 275 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 MBTPS1Q14703 1052 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 ZSCAN29Q8IWY8 852 aaPredicted RBP8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 ASB16Q96NS5 453 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 LIN7BQ9HAP6 207 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 SOX13Q9UN79 622 aa8.02□□□□□ -1.13
AC003001.1-201ENST00000443247 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 DSC3Q14574 896 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 TXNRD3Q86VQ6 643 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 GALNT11Q8NCW6 608 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 BSNDQ8WZ55 320 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 TPSG1Q9NRR2 321 aa8.01□□□□□ -1.13
AC003001.1-201ENST00000443247 PNMA6FA0A0J9YX94 578 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 FSCN2O14926 492 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 PLCB3Q01970 1234 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
AC003001.1-201ENST00000443247 CCNJLQ8IV13 435 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 TCF12Q99081 682 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 EHD4Q9H223 541 aa8□□□□□ -1.13
AC003001.1-201ENST00000443247 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
AC003001.1-201ENST00000443247 MAPK8P45983 427 aa7.99□□□□□ -1.13
AC003001.1-201ENST00000443247 PIP4K2BP78356 416 aa7.99□□□□□ -1.13
AC003001.1-201ENST00000443247 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
AC003001.1-201ENST00000443247 KIAA0319Q5VV43 1072 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms