RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 NECTIN1Q15223 517 aa17.56■□□□□ 0.4
LINC00299-202ENST00000442956 LRRFIP1Q32MZ4 808 aaKnown RBP17.56■□□□□ 0.4
LINC00299-202ENST00000442956 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
LINC00299-202ENST00000442956 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
LINC00299-202ENST00000442956 HELLSQ9NRZ9 838 aa17.56■□□□□ 0.4
LINC00299-202ENST00000442956 SERPINB2P05120 415 aa17.56■□□□□ 0.4
LINC00299-202ENST00000442956 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
LINC00299-202ENST00000442956 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
LINC00299-202ENST00000442956 CYP2E1P05181 493 aaPredicted RBP17.55■□□□□ 0.4
LINC00299-202ENST00000442956 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
LINC00299-202ENST00000442956 KCNB2Q92953 911 aa17.55■□□□□ 0.4
LINC00299-202ENST00000442956 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
LINC00299-202ENST00000442956 HMG20BQ9P0W2 317 aa17.54■□□□□ 0.4
LINC00299-202ENST00000442956 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
LINC00299-202ENST00000442956 BCAMP50895 628 aa17.54■□□□□ 0.4
LINC00299-202ENST00000442956 DDR1Q08345 913 aa17.54■□□□□ 0.4
LINC00299-202ENST00000442956 RASGRF1Q13972 1273 aa17.54■□□□□ 0.4
LINC00299-202ENST00000442956 TTF1Q15361 905 aaPredicted RBP17.54■□□□□ 0.4
LINC00299-202ENST00000442956 ST5P78524 1137 aa17.53■□□□□ 0.4
LINC00299-202ENST00000442956 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
LINC00299-202ENST00000442956 COL23A1Q86Y22 540 aaPredicted RBP17.53■□□□□ 0.4
LINC00299-202ENST00000442956 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
LINC00299-202ENST00000442956 MAST3O60307 1309 aa17.53■□□□□ 0.4
LINC00299-202ENST00000442956 WTIPA6NIX2 430 aaPredicted RBP17.53■□□□□ 0.4
LINC00299-202ENST00000442956 SLC27A2O14975 620 aa17.53■□□□□ 0.4
LINC00299-202ENST00000442956 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
LINC00299-202ENST00000442956 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.4
LINC00299-202ENST00000442956 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.4
LINC00299-202ENST00000442956 MCM2P49736 904 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 NBR1Q14596 966 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 WASHC4Q2M389 1173 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 RNF20Q5VTR2 975 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
LINC00299-202ENST00000442956 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
LINC00299-202ENST00000442956 ARAP2Q8WZ64 1704 aa17.52■□□□□ 0.39
LINC00299-202ENST00000442956 TAF1P21675 1872 aa17.52■□□□□ 0.39
LINC00299-202ENST00000442956 M0R2C6 588 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 GRAPQ13588 217 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 ADCK5Q3MIX3 580 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 FLAD1Q8NFF5 587 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
LINC00299-202ENST00000442956 JAKMIP1Q96N16 626 aaKnown RBP17.51■□□□□ 0.39
LINC00299-202ENST00000442956 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
LINC00299-202ENST00000442956 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
LINC00299-202ENST00000442956 IDH1O75874 414 aaKnown RBP17.5■□□□□ 0.39
LINC00299-202ENST00000442956 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
LINC00299-202ENST00000442956 DDIT3P35638 169 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 NLGN1Q8N2Q7 840 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 APPBP2Q92624 585 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 GYG1P46976 350 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
LINC00299-202ENST00000442956 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
LINC00299-202ENST00000442956 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
LINC00299-202ENST00000442956 ADD2P35612 726 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 CAVIN4Q5BKX8 364 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
LINC00299-202ENST00000442956 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 DSCC1Q9BVC3 393 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 ZNF804BA4D1E1 1349 aa17.49■□□□□ 0.39
LINC00299-202ENST00000442956 HSPD1P10809 573 aaKnown RBP17.48■□□□□ 0.39
LINC00299-202ENST00000442956 CPA1P15085 419 aa17.48■□□□□ 0.39
LINC00299-202ENST00000442956 TTC14Q96N46 770 aa17.48■□□□□ 0.39
LINC00299-202ENST00000442956 PUS7LQ9H0K6 701 aaKnown RBP17.48■□□□□ 0.39
LINC00299-202ENST00000442956 ZSWIM6Q9HCJ5 1215 aa17.48■□□□□ 0.39
LINC00299-202ENST00000442956 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
LINC00299-202ENST00000442956 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
LINC00299-202ENST00000442956 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
LINC00299-202ENST00000442956 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
LINC00299-202ENST00000442956 UBE3CQ15386 1083 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
LINC00299-202ENST00000442956 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
LINC00299-202ENST00000442956 PDE6AP16499 860 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 KLRK1P26718 216 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 PSMA5P28066 241 aa17.47■□□□□ 0.39
LINC00299-202ENST00000442956 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
LINC00299-202ENST00000442956 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
LINC00299-202ENST00000442956 MAP3K12Q12852 859 aa17.46■□□□□ 0.39
LINC00299-202ENST00000442956 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
LINC00299-202ENST00000442956 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
LINC00299-202ENST00000442956 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
LINC00299-202ENST00000442956 CYP21A2P08686 494 aa17.46■□□□□ 0.38
LINC00299-202ENST00000442956 AK2P54819 239 aa17.46■□□□□ 0.38
LINC00299-202ENST00000442956 NFKBIBQ15653 356 aa17.46■□□□□ 0.38
LINC00299-202ENST00000442956 SLC51AQ86UW1 340 aa17.46■□□□□ 0.38
LINC00299-202ENST00000442956 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.38
LINC00299-202ENST00000442956 PDRG1Q9NUG6 133 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms