RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 AACSQ86V21 672 aa16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 GRIN3BO60391 1043 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 FGFR2P21802 821 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 ADORA1P30542 326 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 TIMM10P62072 90 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 WASHC4Q2M389 1173 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 TLR7Q9NYK1 1049 aaKnown RBP16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
TM9SF4-204ENST00000442842 G3V3G9 751 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 ZC3H12CQ9C0D7 883 aaKnown RBP16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
TM9SF4-204ENST00000442842 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 GYG1P46976 350 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 UTRNP46939 3433 aa16.67■□□□□ 0.26
TM9SF4-204ENST00000442842 PRELPP51888 382 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 DBNDD1Q9H9R9 158 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 IRS2Q9Y4H2 1338 aa16.66■□□□□ 0.26
TM9SF4-204ENST00000442842 LMNB1P20700 586 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 NUCB1Q02818 461 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 NIM1KQ8IY84 436 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 COL4A5P29400 1685 aa16.65■□□□□ 0.26
TM9SF4-204ENST00000442842 ECE2O60344 883 aa16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 BCAMP50895 628 aa16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 TTC39AQ5SRH9 613 aa16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
TM9SF4-204ENST00000442842 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 PHKA1P46020 1223 aa16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 C9orf131Q5VYM1 1079 aa16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 FAM84BQ96KN1 310 aaPredicted RBP16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
TM9SF4-204ENST00000442842 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
TM9SF4-204ENST00000442842 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
TM9SF4-204ENST00000442842 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
TM9SF4-204ENST00000442842 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
TM9SF4-204ENST00000442842 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
TM9SF4-204ENST00000442842 GPATCH3Q96I76 525 aa16.61■□□□□ 0.25
TM9SF4-204ENST00000442842 CD209Q9NNX6 404 aa16.61■□□□□ 0.25
TM9SF4-204ENST00000442842 GNL3LQ9NVN8 582 aaKnown RBP16.61■□□□□ 0.25
TM9SF4-204ENST00000442842 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
TM9SF4-204ENST00000442842 MX1P20591 662 aa16.6■□□□□ 0.25
TM9SF4-204ENST00000442842 FBXO33Q7Z6M2 555 aa16.6■□□□□ 0.25
TM9SF4-204ENST00000442842 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
TM9SF4-204ENST00000442842 COL1A1P02452 1464 aaPredicted RBP16.6■□□□□ 0.25
TM9SF4-204ENST00000442842 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
TM9SF4-204ENST00000442842 PDE4AP27815 886 aa16.59■□□□□ 0.25
TM9SF4-204ENST00000442842 RAD17O75943 681 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 IL1R1P14778 569 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 SCARF1Q14162 830 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 PI16Q6UXB8 463 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 ZNRF3Q9ULT6 936 aa16.58■□□□□ 0.24
TM9SF4-204ENST00000442842 SALL3Q9BXA9 1300 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 GTF2IP78347 998 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 SNRKQ9NRH2 765 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
TM9SF4-204ENST00000442842 MCAMP43121 646 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms