RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 PARP10Q53GL7 1025 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 PPP4R3BQ5MIZ7 849 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 SLC10A5Q5PT55 438 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
HDAC9-215ENST00000441986 SP8Q8IXZ3 490 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 ZNF34Q8IZ26 560 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 PHOX2BQ99453 314 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 MCOLN1Q9GZU1 580 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
HDAC9-215ENST00000441986 ADAMTSL1Q8N6G6 1762 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 ARFGEF2Q9Y6D5 1785 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 TNRC18O15417 2968 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-215ENST00000441986 MS4A1P11836 297 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 GMPSP49915 693 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-215ENST00000441986 AOC3Q16853 763 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 DPP8Q6V1X1 898 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-215ENST00000441986 TTLL7Q6ZT98 887 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 MPNDQ8N594 471 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 RTFDC1Q9BY42 306 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-215ENST00000441986 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-215ENST00000441986 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 ZNF408Q9H9D4 720 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
HDAC9-215ENST00000441986 CDHR2Q9BYE9 1310 aa8.12□□□□□ -1.11
HDAC9-215ENST00000441986 PRSS12P56730 875 aa8.12□□□□□ -1.11
HDAC9-215ENST00000441986 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
HDAC9-215ENST00000441986 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-215ENST00000441986 PXYLP1Q8TE99 480 aa8.12□□□□□ -1.11
HDAC9-215ENST00000441986 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
HDAC9-215ENST00000441986 PNNQ9H307 717 aaKnown RBP8.12□□□□□ -1.11
HDAC9-215ENST00000441986 CNOT7Q9UIV1 285 aaKnown RBP8.12□□□□□ -1.11
HDAC9-215ENST00000441986 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
HDAC9-215ENST00000441986 IBTKQ9P2D0 1353 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 UBN2Q6ZU65 1347 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 RAD17O75943 681 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 NTSR2O95665 410 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 HUNKP57058 714 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 KIAA2012Q0VF49 1180 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 USP48Q86UV5 1035 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 C2orf69Q8N8R5 385 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 DPF2Q92785 391 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 CDCA7LQ96GN5 454 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-215ENST00000441986 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
HDAC9-215ENST00000441986 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 BCORQ6W2J9 1755 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 PPP2R1AP30153 589 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 HSP90AB3PQ58FF7 597 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 RGMBQ6NW40 437 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 TMC4Q7Z404 712 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 CDAN1Q8IWY9 1227 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 DCPSQ96C86 337 aaKnown RBP8.1□□□□□ -1.11
HDAC9-215ENST00000441986 SAGE1Q9NXZ1 904 aa8.1□□□□□ -1.11
HDAC9-215ENST00000441986 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.11
HDAC9-215ENST00000441986 ZNF157P51786 506 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-215ENST00000441986 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
HDAC9-215ENST00000441986 COL4A5P29400 1685 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 ABCC4O15439 1325 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 TRPA1O75762 1119 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 EIF2S2P20042 333 aaKnown RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 COL9A1P20849 921 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 PTPREP23469 700 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 RPS12P25398 132 aaKnown RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 KIF23Q02241 960 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 GRAPQ13588 217 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 KRT26Q7Z3Y9 468 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 GRAPLQ8TC17 118 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 FAM217BQ9NTX9 383 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 RNF186Q9NXI6 227 aa8.08□□□□□ -1.12
HDAC9-215ENST00000441986 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
HDAC9-215ENST00000441986 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 YDJCA8MPS7 323 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-215ENST00000441986 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-215ENST00000441986 TCIRG1Q13488 830 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 NFE2L2Q16236 605 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 COPS6Q7L5N1 327 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 SAMD7Q7Z3H4 446 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 NLRP10Q86W26 655 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 TRPM4Q8TD43 1214 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 THUMPD2Q9BTF0 503 aaKnown RBP8.07□□□□□ -1.12
HDAC9-215ENST00000441986 BABAM1Q9NWV8 329 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 TSPYL4Q9UJ04 414 aa8.07□□□□□ -1.12
HDAC9-215ENST00000441986 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
HDAC9-215ENST00000441986 SH3TC1Q8TE82 1336 aa8.06□□□□□ -1.12
HDAC9-215ENST00000441986 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
HDAC9-215ENST00000441986 PSMD14O00487 310 aa8.06□□□□□ -1.12
HDAC9-215ENST00000441986 AIMP1Q12904 312 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms