RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-206ENST00000441580 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
CPSF4-206ENST00000441580 DEKP35659 375 aaKnown RBP15.73■□□□□ 0.11
CPSF4-206ENST00000441580 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
CPSF4-206ENST00000441580 NOL8Q76FK4 1167 aaKnown RBP15.73■□□□□ 0.11
CPSF4-206ENST00000441580 CARMIL3Q8ND23 1372 aa15.73■□□□□ 0.11
CPSF4-206ENST00000441580 HMGB1P09429 215 aaKnown RBP15.72■□□□□ 0.11
CPSF4-206ENST00000441580 RPS6KB1P23443 525 aa15.72■□□□□ 0.11
CPSF4-206ENST00000441580 MCAMP43121 646 aa15.72■□□□□ 0.11
CPSF4-206ENST00000441580 ZAP70P43403 619 aa15.72■□□□□ 0.11
CPSF4-206ENST00000441580 GSE1Q14687 1217 aa15.72■□□□□ 0.11
CPSF4-206ENST00000441580 ADCK5Q3MIX3 580 aa15.72■□□□□ 0.11
CPSF4-206ENST00000441580 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
CPSF4-206ENST00000441580 SKOR2Q2VWA4 1001 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-206ENST00000441580 SLC27A3Q5K4L6 730 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 SLC10A5Q5PT55 438 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 CCDC129Q6ZRS4 1044 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 FAM196AQ6ZSG2 479 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 PTF1AQ7RTS3 328 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 ANKRD18AQ8IVF6 992 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 SETDB2Q96T68 719 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 BCL2L12Q9HB09 334 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 MAST2Q6P0Q8 1798 aa15.71■□□□□ 0.11
CPSF4-206ENST00000441580 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
CPSF4-206ENST00000441580 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-206ENST00000441580 SCARF1Q14162 830 aa15.7■□□□□ 0.1
CPSF4-206ENST00000441580 ERFEQ4G0M1 354 aa15.7■□□□□ 0.1
CPSF4-206ENST00000441580 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-206ENST00000441580 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
CPSF4-206ENST00000441580 SEC31BQ9NQW1 1179 aa15.7■□□□□ 0.1
CPSF4-206ENST00000441580 CTNNA3Q9UI47 895 aa15.7■□□□□ 0.1
CPSF4-206ENST00000441580 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-206ENST00000441580 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
CPSF4-206ENST00000441580 WDR33Q9C0J8 1336 aaKnown RBP15.69■□□□□ 0.1
CPSF4-206ENST00000441580 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 M0R2C6 588 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 BAG4O95429 457 aaKnown RBP15.69■□□□□ 0.1
CPSF4-206ENST00000441580 BRD1O95696 1058 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 PHKA1P46020 1223 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 NEK1Q96PY6 1258 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
CPSF4-206ENST00000441580 DUOX1Q9NRD9 1551 aa15.69■□□□□ 0.1
CPSF4-206ENST00000441580 COL4A1P02462 1669 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 HSPD1P10809 573 aaKnown RBP15.68■□□□□ 0.1
CPSF4-206ENST00000441580 ADD2P35612 726 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 CHRNDQ07001 517 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 UBE3CQ15386 1083 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
CPSF4-206ENST00000441580 SRP68Q9UHB9 627 aaKnown RBP15.68■□□□□ 0.1
CPSF4-206ENST00000441580 SMC3Q9UQE7 1217 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 ZMYM6O95789 1325 aa15.68■□□□□ 0.1
CPSF4-206ENST00000441580 MYH13Q9UKX3 1938 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 TRAK2O60296 914 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 CYP21A2P08686 494 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 RFC4P35249 363 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 KCNQ4P56696 695 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 TRAPPC3LQ5T215 181 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 TPTE2Q6XPS3 522 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 SPATA5Q8NB90 893 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 OSBP2Q969R2 916 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 ZNF804BA4D1E1 1349 aa15.67■□□□□ 0.1
CPSF4-206ENST00000441580 CPA1P15085 419 aa15.66■□□□□ 0.1
CPSF4-206ENST00000441580 UBE4AQ14139 1066 aa15.66■□□□□ 0.1
CPSF4-206ENST00000441580 PI16Q6UXB8 463 aa15.66■□□□□ 0.1
CPSF4-206ENST00000441580 ARHGEF1Q92888 912 aaKnown RBP15.66■□□□□ 0.1
CPSF4-206ENST00000441580 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
CPSF4-206ENST00000441580 GNL3LQ9NVN8 582 aaKnown RBP15.66■□□□□ 0.1
CPSF4-206ENST00000441580 GPAA1O43292 621 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 CHGBP05060 677 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 PDE6AP16499 860 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 MAP3K12Q12852 859 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
CPSF4-206ENST00000441580 ZNF772Q68DY9 489 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-206ENST00000441580 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
CPSF4-206ENST00000441580 PIH1D3Q9NQM4 214 aaKnown RBP15.65■□□□□ 0.1
CPSF4-206ENST00000441580 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
CPSF4-206ENST00000441580 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
CPSF4-206ENST00000441580 LARGE1O95461 756 aa15.64■□□□□ 0.09
CPSF4-206ENST00000441580 PKP1Q13835 747 aa15.64■□□□□ 0.09
CPSF4-206ENST00000441580 CCDC83Q8IWF9 413 aa15.64■□□□□ 0.09
CPSF4-206ENST00000441580 HELBQ8NG08 1087 aaPredicted RBP15.64■□□□□ 0.09
CPSF4-206ENST00000441580 ANKRD2Q9GZV1 360 aa15.64■□□□□ 0.09
CPSF4-206ENST00000441580 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.09
CPSF4-206ENST00000441580 WDR19Q8NEZ3 1342 aa15.64■□□□□ 0.09
CPSF4-206ENST00000441580 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
CPSF4-206ENST00000441580 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 SEMA3EO15041 775 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 ZBTB22O15209 634 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 NPHP1O15259 732 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 TOB2Q14106 344 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-206ENST00000441580 ME3Q16798 604 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 SLC9C2Q5TAH2 1124 aa15.63■□□□□ 0.09
CPSF4-206ENST00000441580 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms