RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 USP17L4A6NCW7 530 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
LTBR-202ENST00000440421 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
LTBR-202ENST00000440421 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
LTBR-202ENST00000440421 USP17L1Q7RTZ2 530 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 PSME4Q14997 1843 aa17.24■□□□□ 0.35
LTBR-202ENST00000440421 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
LTBR-202ENST00000440421 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
LTBR-202ENST00000440421 KLRG1Q96E93 195 aa17.24■□□□□ 0.35
LTBR-202ENST00000440421 TRAF5O00463 557 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 EGFRP00533 1210 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 TRIM27P14373 513 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
LTBR-202ENST00000440421 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
LTBR-202ENST00000440421 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 MEIS3Q99687 375 aa17.22■□□□□ 0.35
LTBR-202ENST00000440421 GLIS2Q9BZE0 524 aaPredicted RBP17.22■□□□□ 0.35
LTBR-202ENST00000440421 GTF2IP78347 998 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
LTBR-202ENST00000440421 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
LTBR-202ENST00000440421 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.35
LTBR-202ENST00000440421 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
LTBR-202ENST00000440421 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.34
LTBR-202ENST00000440421 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 METTL24Q5JXM2 366 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 GMLQ99445 158 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
LTBR-202ENST00000440421 ZNF609O15014 1411 aa17.2■□□□□ 0.34
LTBR-202ENST00000440421 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
LTBR-202ENST00000440421 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
LTBR-202ENST00000440421 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
LTBR-202ENST00000440421 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
LTBR-202ENST00000440421 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
LTBR-202ENST00000440421 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
LTBR-202ENST00000440421 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
LTBR-202ENST00000440421 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
LTBR-202ENST00000440421 GNAI3P08754 354 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 GYG1P46976 350 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
LTBR-202ENST00000440421 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 USP48Q86UV5 1035 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
LTBR-202ENST00000440421 SIL1Q9H173 461 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 ZNF408Q9H9D4 720 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
LTBR-202ENST00000440421 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
LTBR-202ENST00000440421 EYA2O00167 538 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 PDE8BO95263 885 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 IL1R1P14778 569 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 SCARF1Q14162 830 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 CST9Q5W186 159 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 KIAA0825Q8IV33 1275 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
LTBR-202ENST00000440421 ADM5C9JUS6 153 aa17.15■□□□□ 0.34
LTBR-202ENST00000440421 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
LTBR-202ENST00000440421 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
LTBR-202ENST00000440421 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
LTBR-202ENST00000440421 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
LTBR-202ENST00000440421 FAM84BQ96KN1 310 aaPredicted RBP17.15■□□□□ 0.34
LTBR-202ENST00000440421 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
LTBR-202ENST00000440421 ANGEL2Q5VTE6 544 aaKnown RBP17.14■□□□□ 0.33
LTBR-202ENST00000440421 CERS5Q8N5B7 392 aa17.14■□□□□ 0.33
LTBR-202ENST00000440421 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
LTBR-202ENST00000440421 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
LTBR-202ENST00000440421 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
LTBR-202ENST00000440421 DEFB115Q30KQ5 88 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
LTBR-202ENST00000440421 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
LTBR-202ENST00000440421 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
LTBR-202ENST00000440421 IQSEC3Q9UPP2 1182 aaPredicted RBP17.13■□□□□ 0.33
LTBR-202ENST00000440421 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
LTBR-202ENST00000440421 SASH1O94885 1247 aa17.12■□□□□ 0.33
LTBR-202ENST00000440421 GNAI2P04899 355 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms