RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 ST7Q9NRC1 585 aa21.33■■□□□ 1.01
PTPRJ-202ENST00000440289 CLIC4Q9Y696 253 aa21.33■■□□□ 1.01
PTPRJ-202ENST00000440289 NPHP4O75161 1426 aaPredicted RBP21.33■■□□□ 1
PTPRJ-202ENST00000440289 SMTNL1A8MU46 457 aa21.33■■□□□ 1
PTPRJ-202ENST00000440289 GTF2F1P35269 517 aaKnown RBP eCLIP21.33■■□□□ 1
PTPRJ-202ENST00000440289 CGNQ9P2M7 1197 aaKnown RBP21.33■■□□□ 1
PTPRJ-202ENST00000440289 ZNF609O15014 1411 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 AIFM3Q96NN9 605 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 GOLGA8BA8MQT2 603 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 CTDNEP1O95476 244 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 NDUFA8P51970 172 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 CABP4P57796 275 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 E7EWF7 191 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 ATP5JP18859 108 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 SYT10Q6XYQ8 523 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 TTLL7Q6ZT98 887 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 TOMM22Q9NS69 142 aa21.32■■□□□ 1
PTPRJ-202ENST00000440289 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
PTPRJ-202ENST00000440289 RGPD2P0DJD1 1756 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 SPECC1Q5M775 1068 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 SYNE3Q6ZMZ3 975 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 PCDHA7Q9UN72 937 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 KLF18A0A0U1RQI7 1052 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 TATP17735 454 aaPredicted RBP21.31■■□□□ 1
PTPRJ-202ENST00000440289 C8orf76Q96K31 380 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
PTPRJ-202ENST00000440289 ZSCAN16Q9H4T2 348 aaPredicted RBP21.31■■□□□ 1
PTPRJ-202ENST00000440289 ANO10Q9NW15 660 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 FMN2Q9NZ56 1722 aa21.31■■□□□ 1
PTPRJ-202ENST00000440289 A1BGP04217 495 aa21.3■■□□□ 1
PTPRJ-202ENST00000440289 KRT28Q7Z3Y7 464 aa21.3■■□□□ 1
PTPRJ-202ENST00000440289 ANKARQ7Z5J8 1434 aa21.3■■□□□ 1
PTPRJ-202ENST00000440289 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
PTPRJ-202ENST00000440289 MED23Q9ULK4 1368 aa21.3■■□□□ 1
PTPRJ-202ENST00000440289 ORC3Q9UBD5 711 aaPredicted RBP21.3■■□□□ 1
PTPRJ-202ENST00000440289 DENND2AQ9ULE3 1009 aa21.3■■□□□ 1
PTPRJ-202ENST00000440289 PXDNLA1KZ92 1463 aa21.29■■□□□ 1
PTPRJ-202ENST00000440289 HSPD1P10809 573 aaKnown RBP21.29■■□□□ 1
PTPRJ-202ENST00000440289 IQCB1Q15051 598 aa21.29■■□□□ 1
PTPRJ-202ENST00000440289 ARHGEF25Q86VW2 580 aa21.29■■□□□ 1
PTPRJ-202ENST00000440289 KCNB2Q92953 911 aa21.29■■□□□ 1
PTPRJ-202ENST00000440289 XPO4Q9C0E2 1151 aaKnown RBP21.29■■□□□ 1
PTPRJ-202ENST00000440289 KBTBD3Q8NAB2 608 aa21.29■■□□□ 1
PTPRJ-202ENST00000440289 PDILTQ8N807 584 aa21.28■■□□□ 1
PTPRJ-202ENST00000440289 MYL10Q9BUA6 226 aa21.28■■□□□ 1
PTPRJ-202ENST00000440289 FAM208AQ9UK61 1670 aaKnown RBP21.28■■□□□ 1
PTPRJ-202ENST00000440289 RALYLQ86SE5 291 aaKnown RBP21.28■■□□□ 1
PTPRJ-202ENST00000440289 SLC52A2Q9HAB3 445 aa21.28■■□□□ 1
PTPRJ-202ENST00000440289 FAM160A1Q05DH4 1040 aa21.28■■□□□ 1
PTPRJ-202ENST00000440289 CREBRFQ8IUR6 639 aa21.28■■□□□ 1
PTPRJ-202ENST00000440289 MRPS27Q92552 414 aaKnown RBP21.28■■□□□ 1
PTPRJ-202ENST00000440289 A0A1B0GUL7 405 aa21.27■■□□□ 1
PTPRJ-202ENST00000440289 M0R2C6 588 aa21.27■■□□□ 1
PTPRJ-202ENST00000440289 PDIA3P30101 505 aaKnown RBP21.27■■□□□ 1
PTPRJ-202ENST00000440289 ERCC6LQ2NKX8 1250 aa21.27■■□□□ 1
PTPRJ-202ENST00000440289 ADORA1P30542 326 aa21.27■■□□□ 1
PTPRJ-202ENST00000440289 LRRN4CLQ8ND94 238 aa21.27■■□□□ 1
PTPRJ-202ENST00000440289 SERPINC1P01008 464 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 ATP1A3P13637 1013 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 TTC39AQ5SRH9 613 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 MICU3Q86XE3 530 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 SNW1Q13573 536 aaKnown RBP21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 DHX40Q8IX18 779 aaKnown RBP21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 SFPQP23246 707 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 KIF18AQ8NI77 898 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 PHKBQ93100 1093 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 HAUS7Q99871 368 aa21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 NAT10Q9H0A0 1025 aaKnown RBP21.26■□□□□ 0.99
PTPRJ-202ENST00000440289 PFKFB2O60825 505 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 SLC3A2P08195 630 aaKnown RBP21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 ANKRD7Q92527 254 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 COPRSQ9NQ92 184 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 PAXBP1Q9Y5B6 917 aa21.25■□□□□ 0.99
PTPRJ-202ENST00000440289 EPC1Q9H2F5 836 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 INCENPQ9NQS7 918 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 DNAI1Q9UI46 699 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 MAST3O60307 1309 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 PRC1O43663 620 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 GPTP24298 496 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 ADD1P35611 737 aaKnown RBP21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 NFXL1Q6ZNB6 911 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 IDH1O75874 414 aaKnown RBP21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 KMT5BQ4FZB7 885 aa21.24■□□□□ 0.99
PTPRJ-202ENST00000440289 UBE2Q2LH0YL09 131 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 FBXO38Q6PIJ6 1188 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 ZSWIM4Q9H7M6 989 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 CEP126Q9P2H0 1117 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 CTNNA3Q9UI47 895 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 RCOR1Q9UKL0 485 aa21.23■□□□□ 0.99
PTPRJ-202ENST00000440289 SPTLC2O15270 562 aa21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 CTIFO43310 598 aaKnown RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 RFX5P48382 616 aaPredicted RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 SYNE4Q8N205 404 aa21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 FAM89AQ96GI7 184 aa21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 CLIC6Q96NY7 704 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms