RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 CCDC74AQ96AQ1 378 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 TRIM11Q96F44 468 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 MUC3BQ9H195 1237 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 SPDYE3A6NKU9 549 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 KCNMA1Q12791 1236 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 MSL1Q68DK7 614 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 DTWD1Q8N5C7 304 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 OSMRQ99650 979 aa4.52□□□□□ -1.69
AC009541.1-201ENST00000438279 PNMA6FA0A0J9YX94 578 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 PDE2AO00408 941 aaPredicted RBP4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 POLR3DP05423 398 aaPredicted RBP4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 ACPPP15309 386 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 BAG6P46379 1132 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 PRPF40BQ6NWY9 871 aaKnown RBP4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 NXPE3Q969Y0 559 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 SRA1Q9HD15 236 aaKnown RBP4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 PTPRAP18433 802 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 CEP135Q66GS9 1140 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 POP1Q99575 1024 aaKnown RBP4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 SUV39H2Q9H5I1 410 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 LATS2Q9NRM7 1088 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 TRIM33Q9UPN9 1127 aa4.51□□□□□ -1.69
AC009541.1-201ENST00000438279 ATP2B2Q01814 1243 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 WFDC8Q8IUA0 241 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 CCNJLQ8IV13 435 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 FRMD6Q96NE9 622 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 TCF12Q99081 682 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 PLVAPQ9BX97 442 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 NPHS2Q9NP85 383 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 GIPC1O14908 333 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 CDC27P30260 824 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 MAPK8P45983 427 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 MFAP1P55081 439 aaKnown RBP4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 EAPPQ56P03 285 aaPredicted RBP4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 FBXO33Q7Z6M2 555 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 MAP4K3Q8IVH8 894 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 LIN7BQ9HAP6 207 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 SOX13Q9UN79 622 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 TRAK1Q9UPV9 953 aa4.5□□□□□ -1.69
AC009541.1-201ENST00000438279 PRPF40AO75400 957 aaKnown RBP4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 PTPN12Q05209 780 aaKnown RBP4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 DCAF11Q8TEB1 546 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 LDHBP07195 334 aaKnown RBP4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 GSK3AP49840 483 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 IL22RA1Q8N6P7 574 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 GLIS3Q8NEA6 775 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 WNT8BQ93098 351 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 EHD4Q9H223 541 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 A0A0A0MRY4 1105 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 COL8A1P27658 744 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 RAC1P63000 192 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 GDF6Q6KF10 455 aaPredicted RBP4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 ADAMTSL4Q6UY14 1074 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 EPS8L3Q8TE67 593 aaKnown RBP4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 BSNDQ8WZ55 320 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 HHIPQ96QV1 700 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 PPME1Q9Y570 386 aa4.49□□□□□ -1.69
AC009541.1-201ENST00000438279 GADD45BO75293 160 aaPredicted RBP4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 SPATA31C1P0DKV0 1188 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 ITPKAP23677 461 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 PRRT3Q5FWE3 981 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 TRAPPC3LQ5T215 181 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 FBXO11Q86XK2 927 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 DMRTC2Q8IXT2 367 aaPredicted RBP4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 FMR1NBQ8N0W7 255 aaPredicted RBP4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 SRCIN1Q9C0H9 1055 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 NLRP2Q9NX02 1062 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 H3BRJ5 948 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 TRPA1O75762 1119 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 IRS1P35568 1242 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 TRIM28Q13263 835 aaKnown RBP4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 GRM2Q14416 872 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 ZFYVE1Q9HBF4 777 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 WWC3Q9ULE0 1092 aa4.48□□□□□ -1.69
AC009541.1-201ENST00000438279 A0A096LPE4 126 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 TMEM238LA0A1B0GVL6 79 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 A0A1W2PPZ6 126 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 FAM177BA6PVY3 158 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 RPS26P11Q5JNZ5 115 aaPredicted RBP4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 ANKRD24Q8TF21 1146 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 LACRTQ9GZZ8 138 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 SOX17Q9H6I2 414 aaPredicted RBP4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 SPG7Q9UQ90 795 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 TM4SF5O14894 197 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 EIF4EBP3O60516 100 aaPredicted RBP4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 XRCC5P13010 732 aaKnown RBP4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 ELNP15502 786 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 EPHA1P21709 976 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 CABP4P57796 275 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 PIP4K2BP78356 416 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 RASSF7Q02833 373 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 VN1R5Q7Z5H4 357 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 SETDB2Q96T68 719 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 BCO2Q9BYV7 579 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 OSGEPQ9NPF4 335 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 PPP4R2Q9NY27 417 aa4.47□□□□□ -1.69
AC009541.1-201ENST00000438279 DEAF1O75398 565 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms