RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 AGBL3Q8NEM8 1001 aa16.35■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 WTIPA6NIX2 430 aaPredicted RBP16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 SOX1O00570 391 aaPredicted RBP16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 PDIA6Q15084 440 aa16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 ZC3H12CQ9C0D7 883 aaKnown RBP16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 PRO3102Q9H379 93 aa16.34■□□□□ 0.21
SMAD9-IT1-201ENST00000437983 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PER1O15534 1290 aaPredicted RBP16.33■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 CRHR2Q13324 411 aa16.33■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 G3V3G9 751 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 NF2P35240 595 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 DPF3Q92784 378 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 LRCH3Q96II8 777 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PTCH2Q9Y6C5 1203 aa16.32■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 INHBEP58166 350 aa16.31■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SP3Q02447 781 aa16.3■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 WNT10BO00744 389 aa16.29■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 UFL1O94874 794 aa16.29■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 WNK4Q96J92 1243 aa16.29■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PTPN18Q99952 460 aa16.28■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SASH1O94885 1247 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 COPS6Q7L5N1 327 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 UNC80Q8N2C7 3258 aa16.27■□□□□ 0.2
SMAD9-IT1-201ENST00000437983 PSME4Q14997 1843 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 USP17L3A6NCW0 530 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 USP17L4A6NCW7 530 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 GJA5P36382 358 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 USP17L1Q7RTZ2 530 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 ANKIB1Q9P2G1 1089 aa16.26■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 ZBTB48P10074 688 aaPredicted RBP16.25■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 GGA1Q9UJY5 639 aa16.25■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 SSC5DA1L4H1 1573 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 MTFR1Q15390 333 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 LAMB1P07942 1786 aa16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 OGFOD1Q8N543 542 aa16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 ARHGAP39Q9C0H5 1083 aa16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
SMAD9-IT1-201ENST00000437983 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 TESPA1A2RU30 521 aaPredicted RBP16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 Q7L0L9 218 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 UBE2Q1Q7Z7E8 422 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 APOBEC3FQ8IUX4 373 aaKnown RBP16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 STAP2Q9UGK3 403 aa16.19■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 VCANP13611 3396 aa16.18■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 DLG5Q8TDM6 1919 aa16.18■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ZNF646O15015 1829 aaPredicted RBP16.18■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 DEFB123Q8N688 67 aa16.18■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ZBED3Q96IU2 234 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms