RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
PTCH1-209ENST00000437951 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 GGNBP2Q9H3C7 697 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-209ENST00000437951 FAM169AQ9Y6X4 670 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 SRGAP1Q7Z6B7 1085 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-209ENST00000437951 PARP2Q9UGN5 583 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 MICAL1Q8TDZ2 1067 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
PTCH1-209ENST00000437951 FAF1Q9UNN5 650 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-209ENST00000437951 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-209ENST00000437951 INF2Q27J81 1249 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 AOPEPQ8N6M6 819 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 IQCDQ96DY2 449 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 SMARCC2Q8TAQ2 1214 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 BAG1Q99933 345 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-209ENST00000437951 ZC4H2Q9NQZ6 224 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
PTCH1-209ENST00000437951 AKR1B15C9JRZ8 316 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 METAP2P50579 478 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 ZNF131P52739 623 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 BRD3Q15059 726 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 C8orf74Q6P047 294 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 EVI5O60447 810 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 SNCBQ16143 134 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 SYT10Q6XYQ8 523 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 TBC1D9Q6ZT07 1266 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 COG7P83436 770 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 PAK2Q13177 524 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
PTCH1-209ENST00000437951 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-209ENST00000437951 GOLGA8KD6RF30 607 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 GUCA1BQ9UMX6 200 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTCH1-209ENST00000437951 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
PTCH1-209ENST00000437951 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 UBL4BQ8N7F7 174 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 DRC3Q9H069 523 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 PHACTR2O75167 634 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.33
PTCH1-209ENST00000437951 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 ELP1O95163 1332 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 GSDMBQ8TAX9 411 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 CAPZA3Q96KX2 299 aa12.96□□□□□ -0.33
PTCH1-209ENST00000437951 PUF60Q9UHX1 559 aaKnown RBP12.96□□□□□ -0.33
PTCH1-209ENST00000437951 CRCPO75575 148 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.34
PTCH1-209ENST00000437951 ERCC3P19447 782 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 RILPL1Q5EBL4 403 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 NEK1Q96PY6 1258 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.34
PTCH1-209ENST00000437951 VEZTQ9HBM0 779 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 MED4Q9NPJ6 270 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 CABP4P57796 275 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 UBXN1Q04323 297 aa12.96□□□□□ -0.34
PTCH1-209ENST00000437951 LRRC23Q53EV4 343 aaPredicted RBP12.96□□□□□ -0.34
PTCH1-209ENST00000437951 RNF40O75150 1001 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 PPP2R5EQ16537 467 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 CCDC65Q8IXS2 484 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 INTS4Q96HW7 963 aaKnown RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 IFIT1P09914 478 aaKnown RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 HPDP32754 393 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 POLR3DP05423 398 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 PDE4BQ07343 736 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 NUP58Q9BVL2 599 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-209ENST00000437951 IDEP14735 1019 aa12.95□□□□□ -0.34
PTCH1-209ENST00000437951 HSPA1LP34931 641 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms