RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 NUCB2P80303 420 aa18.4■□□□□ 0.54
SGCE-205ENST00000437425 CHRNDQ07001 517 aa18.4■□□□□ 0.54
SGCE-205ENST00000437425 ZSWIM6Q9HCJ5 1215 aa18.4■□□□□ 0.54
SGCE-205ENST00000437425 SLC27A2O14975 620 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 NPHP1O15259 732 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 CUL4AQ13619 759 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.54
SGCE-205ENST00000437425 RASEFQ8IZ41 740 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 APPBP2Q92624 585 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 TMX3Q96JJ7 454 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.54
SGCE-205ENST00000437425 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 PHF14O94880 888 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 MCAMP43121 646 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 ZAP70P43403 619 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 ANKRD1Q15327 319 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
SGCE-205ENST00000437425 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
SGCE-205ENST00000437425 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
SGCE-205ENST00000437425 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.53
SGCE-205ENST00000437425 ZBTB22O15209 634 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 CASTP20810 708 aaKnown RBP18.38■□□□□ 0.53
SGCE-205ENST00000437425 RPS8P62241 208 aaKnown RBP18.38■□□□□ 0.53
SGCE-205ENST00000437425 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 JAKMIP1Q96N16 626 aaKnown RBP18.38■□□□□ 0.53
SGCE-205ENST00000437425 TTC14Q96N46 770 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 UPF3BQ9BZI7 483 aaKnown RBP18.38■□□□□ 0.53
SGCE-205ENST00000437425 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
SGCE-205ENST00000437425 RPAP1Q9BWH6 1393 aaPredicted RBP18.37■□□□□ 0.53
SGCE-205ENST00000437425 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
SGCE-205ENST00000437425 PTMSP20962 102 aa18.37■□□□□ 0.53
SGCE-205ENST00000437425 NFIXQ14938 502 aa18.37■□□□□ 0.53
SGCE-205ENST00000437425 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
SGCE-205ENST00000437425 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
SGCE-205ENST00000437425 PHKA1P46020 1223 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 SCARF1Q14162 830 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 SPATA5Q8NB90 893 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 HELBQ8NG08 1087 aaPredicted RBP18.36■□□□□ 0.53
SGCE-205ENST00000437425 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
SGCE-205ENST00000437425 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
SGCE-205ENST00000437425 ST5P78524 1137 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 MAP3K12Q12852 859 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 MAST3O60307 1309 aa18.35■□□□□ 0.53
SGCE-205ENST00000437425 SEMA3EO15041 775 aa18.34■□□□□ 0.53
SGCE-205ENST00000437425 IGSF3O75054 1194 aa18.34■□□□□ 0.53
SGCE-205ENST00000437425 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
SGCE-205ENST00000437425 GYS1P13807 737 aa18.34■□□□□ 0.53
SGCE-205ENST00000437425 ADD2P35612 726 aa18.34■□□□□ 0.53
SGCE-205ENST00000437425 WASHC4Q2M389 1173 aa18.34■□□□□ 0.53
SGCE-205ENST00000437425 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
SGCE-205ENST00000437425 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
SGCE-205ENST00000437425 HSPD1P10809 573 aaKnown RBP18.33■□□□□ 0.53
SGCE-205ENST00000437425 MYH7P12883 1935 aa18.33■□□□□ 0.53
SGCE-205ENST00000437425 PDIA4P13667 645 aaKnown RBP18.33■□□□□ 0.53
SGCE-205ENST00000437425 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.53
SGCE-205ENST00000437425 SMIM5Q71RC9 77 aa18.33■□□□□ 0.53
SGCE-205ENST00000437425 SEC62Q99442 399 aaKnown RBP18.33■□□□□ 0.53
SGCE-205ENST00000437425 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.53
SGCE-205ENST00000437425 CASZ1Q86V15 1759 aa18.33■□□□□ 0.52
SGCE-205ENST00000437425 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
SGCE-205ENST00000437425 TM4SF1P30408 202 aa18.33■□□□□ 0.52
SGCE-205ENST00000437425 AK2P54819 239 aa18.33■□□□□ 0.52
SGCE-205ENST00000437425 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
SGCE-205ENST00000437425 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 PDS5AQ29RF7 1337 aaKnown RBP18.32■□□□□ 0.52
SGCE-205ENST00000437425 APBA3O96018 575 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 RPS6KB1P23443 525 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 SLC9C2Q5TAH2 1124 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 CELF1Q92879 486 aaKnown RBP18.32■□□□□ 0.52
SGCE-205ENST00000437425 OSBP2Q969R2 916 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
SGCE-205ENST00000437425 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
SGCE-205ENST00000437425 GRAPQ13588 217 aa18.31■□□□□ 0.52
SGCE-205ENST00000437425 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
SGCE-205ENST00000437425 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
SGCE-205ENST00000437425 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
SGCE-205ENST00000437425 GRAPLQ8TC17 118 aaPredicted RBP18.31■□□□□ 0.52
SGCE-205ENST00000437425 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
SGCE-205ENST00000437425 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 M0R2C6 588 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 IDH1O75874 414 aaKnown RBP18.3■□□□□ 0.52
SGCE-205ENST00000437425 SERPINB2P05120 415 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 PROM2Q8N271 834 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
SGCE-205ENST00000437425 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms