RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 HMG20BQ9P0W2 317 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 ZNF609O15014 1411 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 SLC5A1P13866 664 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 LPIN2Q92539 896 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 CYP21A2P08686 494 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
LINC01516-201ENST00000436140 HIP1O00291 1037 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
LINC01516-201ENST00000436140 ZNF827Q17R98 1081 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 NSFL1CQ9UNZ2 370 aaKnown RBP13.04□□□□□ -0.32
LINC01516-201ENST00000436140 MAST3O60307 1309 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
LINC01516-201ENST00000436140 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
LINC01516-201ENST00000436140 SERPINB2P05120 415 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
LINC01516-201ENST00000436140 GYS1P13807 737 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
LINC01516-201ENST00000436140 SPATA5Q8NB90 893 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 LAMB4A4D0S4 1761 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
LINC01516-201ENST00000436140 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
LINC01516-201ENST00000436140 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
LINC01516-201ENST00000436140 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.32
LINC01516-201ENST00000436140 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.32
LINC01516-201ENST00000436140 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.32
LINC01516-201ENST00000436140 TOMM22Q9NS69 142 aa13.02□□□□□ -0.32
LINC01516-201ENST00000436140 PAPPAQ13219 1627 aa13.02□□□□□ -0.32
LINC01516-201ENST00000436140 ATRNO75882 1429 aa13.02□□□□□ -0.32
LINC01516-201ENST00000436140 PRKAB2O43741 272 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
LINC01516-201ENST00000436140 DEFB132Q7Z7B7 95 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
LINC01516-201ENST00000436140 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 GPAA1O43292 621 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
LINC01516-201ENST00000436140 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 MROH5Q6ZUA9 1318 aa13.02□□□□□ -0.33
LINC01516-201ENST00000436140 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 RNF20Q5VTR2 975 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
LINC01516-201ENST00000436140 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 NUP98P52948 1817 aa13.01□□□□□ -0.33
LINC01516-201ENST00000436140 TAF1P21675 1872 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 FGAP02671 866 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 MCM4P33991 863 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 ANAPC15P60006 121 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
LINC01516-201ENST00000436140 ME3Q16798 604 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 DDX11Q96FC9 970 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 TJP1Q07157 1748 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 FGFR2P21802 821 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 DDR1Q08345 913 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
LINC01516-201ENST00000436140 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
LINC01516-201ENST00000436140 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
LINC01516-201ENST00000436140 FBXW7Q969H0 707 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 NEK1Q96PY6 1258 aa13□□□□□ -0.33
LINC01516-201ENST00000436140 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
LINC01516-201ENST00000436140 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 PDE6AP16499 860 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 BRF1Q92994 677 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 SF3B3Q15393 1217 aaKnown RBP12.99□□□□□ -0.33
LINC01516-201ENST00000436140 Q6ZUG5 572 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 MBD4O95243 580 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
LINC01516-201ENST00000436140 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
LINC01516-201ENST00000436140 AK9Q5TCS8 1911 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 TM4SF1P30408 202 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
LINC01516-201ENST00000436140 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC01516-201ENST00000436140 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
LINC01516-201ENST00000436140 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms