RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
TRAPPC4-202ENST00000434101 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-202ENST00000434101 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
TRAPPC4-202ENST00000434101 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 MYO3BQ8WXR4 1341 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 ZNF646O15015 1829 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 PLIN1O60240 522 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
TRAPPC4-202ENST00000434101 BCAR3O75815 825 aa16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 KLRK1P26718 216 aa16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 TBC1D10BQ4KMP7 808 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
TRAPPC4-202ENST00000434101 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 ZNF280AP59817 542 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 KIF4BQ2VIQ3 1234 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 GMLQ99445 158 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 PUS3Q9BZE2 481 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
TRAPPC4-202ENST00000434101 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 SNAP23O00161 211 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 GNAI3P08754 354 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 TRIM27P14373 513 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 MMP14P50281 582 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 DACT2Q5SW24 774 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 ZKSCAN2Q63HK3 967 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
TRAPPC4-202ENST00000434101 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 JMYQ8N9B5 988 aa16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 LRRFIP2Q9Y608 721 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-202ENST00000434101 TRAF5O00463 557 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 IL1R1P14778 569 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 GTF2IP78347 998 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 MEIS3Q99687 375 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 MYOZ2Q9NPC6 264 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
TRAPPC4-202ENST00000434101 EYA2O00167 538 aa16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 EGFRP00533 1210 aa16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 HDAC9Q9UKV0 1011 aa16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
TRAPPC4-202ENST00000434101 PDE8BO95263 885 aa16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
TRAPPC4-202ENST00000434101 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 RASSF10A6NK89 507 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 CELF2O95319 508 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 FKBP1AP62942 108 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 FMR1Q06787 632 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 SCARF1Q14162 830 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 SULF1Q8IWU6 871 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
TRAPPC4-202ENST00000434101 CIAO1O76071 339 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 SASH1O94885 1247 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 IFIT1P09914 478 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 GYG1P46976 350 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 CST9Q5W186 159 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 TNNQ9UQP3 1299 aa16.46■□□□□ 0.23
TRAPPC4-202ENST00000434101 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 GNAI2P04899 355 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 TDRD7Q8NHU6 1098 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 ZNF408Q9H9D4 720 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
TRAPPC4-202ENST00000434101 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms