RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 NIF3L1Q9GZT8 377 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 RASSF4Q9H2L5 321 aa6.21□□□□□ -1.42
LINC01239-201ENST00000433645 A0A0A0MRY4 1105 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 PDE2AO00408 941 aaPredicted RBP6.2□□□□□ -1.42
LINC01239-201ENST00000433645 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
LINC01239-201ENST00000433645 ELNP15502 786 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 ERCC3P19447 782 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 ATP11AP98196 1134 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 TRAPPC3LQ5T215 181 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 KIAA0319Q5VV43 1072 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
LINC01239-201ENST00000433645 FMR1NBQ8N0W7 255 aaPredicted RBP6.2□□□□□ -1.42
LINC01239-201ENST00000433645 NXPE3Q969Y0 559 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 NACC1Q96RE7 527 aa6.2□□□□□ -1.42
LINC01239-201ENST00000433645 EIF1AYO14602 144 aaKnown RBP6.19□□□□□ -1.42
LINC01239-201ENST00000433645 CDC27P30260 824 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 FGD1P98174 961 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01239-201ENST00000433645 ORC1Q13415 861 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 FBXO11Q86XK2 927 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 IL22RA1Q8N6P7 574 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 WNT8BQ93098 351 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 POP1Q99575 1024 aaKnown RBP6.19□□□□□ -1.42
LINC01239-201ENST00000433645 OSMRQ99650 979 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 TRIM33Q9UPN9 1127 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 PPME1Q9Y570 386 aa6.19□□□□□ -1.42
LINC01239-201ENST00000433645 ZBTB7CA1YPR0 619 aa6.18□□□□□ -1.42
LINC01239-201ENST00000433645 FAM177BA6PVY3 158 aa6.18□□□□□ -1.42
LINC01239-201ENST00000433645 ENOX2Q16206 610 aaKnown RBP6.18□□□□□ -1.42
LINC01239-201ENST00000433645 GDF6Q6KF10 455 aaPredicted RBP6.18□□□□□ -1.42
LINC01239-201ENST00000433645 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
LINC01239-201ENST00000433645 FBF1Q8TES7 1133 aa6.18□□□□□ -1.42
LINC01239-201ENST00000433645 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
LINC01239-201ENST00000433645 ZKSCAN3Q9BRR0 538 aa6.18□□□□□ -1.42
LINC01239-201ENST00000433645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.18□□□□□ -1.42
LINC01239-201ENST00000433645 A0A1W2PP55 124 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 KRBA1A5PL33 1030 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 IGHA1P01876 353 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 CABP4P57796 275 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 CCNJLQ8IV13 435 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 BSNDQ8WZ55 320 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 SOX13Q9UN79 622 aa6.17□□□□□ -1.42
LINC01239-201ENST00000433645 C9orf172C9J069 976 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 APBA3O96018 575 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 NRG1Q02297 640 aaPredicted RBP6.16□□□□□ -1.42
LINC01239-201ENST00000433645 PTPN12Q05209 780 aaKnown RBP6.16□□□□□ -1.42
LINC01239-201ENST00000433645 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
LINC01239-201ENST00000433645 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 IGF2-ASQ6U949 168 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 KLHL23Q8NBE8 558 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 LENG1Q96BZ8 264 aaPredicted RBP6.16□□□□□ -1.42
LINC01239-201ENST00000433645 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
LINC01239-201ENST00000433645 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
LINC01239-201ENST00000433645 H3BRJ5 948 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 DLL1O00548 723 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 ACPPP15309 386 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 PIP4K2BP78356 416 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 SETDB1Q15047 1291 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 CCDC27Q2M243 656 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 USPL1Q5W0Q7 1092 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.42
LINC01239-201ENST00000433645 FRMD6Q96NE9 622 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 TCF12Q99081 682 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 SOX17Q9H6I2 414 aaPredicted RBP6.15□□□□□ -1.42
LINC01239-201ENST00000433645 LIN7BQ9HAP6 207 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 ZFYVE1Q9HBF4 777 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 NPHS2Q9NP85 383 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 OSGEPQ9NPF4 335 aa6.15□□□□□ -1.42
LINC01239-201ENST00000433645 GIPC1O14908 333 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 DEAF1O75398 565 aaPredicted RBP6.14□□□□□ -1.43
LINC01239-201ENST00000433645 POLR3DP05423 398 aaPredicted RBP6.14□□□□□ -1.43
LINC01239-201ENST00000433645 EPHA1P21709 976 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 ITPKAP23677 461 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 PLA2G4EQ3MJ16 856 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 SRCIN1Q9C0H9 1055 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 LACRTQ9GZZ8 138 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 LATS2Q9NRM7 1088 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 NLRP2Q9NX02 1062 aa6.14□□□□□ -1.43
LINC01239-201ENST00000433645 PNMA6FA0A0J9YX94 578 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 TM4SF5O14894 197 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 XRCC5P13010 732 aaKnown RBP6.13□□□□□ -1.43
LINC01239-201ENST00000433645 ATP2B2Q01814 1243 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 ADAMTSL4Q6UY14 1074 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 TMEM130Q8N3G9 435 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 HHIPQ96QV1 700 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 EHD4Q9H223 541 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 PPP4R2Q9NY27 417 aa6.13□□□□□ -1.43
LINC01239-201ENST00000433645 A0A096LPE4 126 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 ANKRD33BA6NCL7 494 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 C1QTNF9BB2RNN3 333 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 LINC01387J3KSC0 135 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 FSCN2O14926 492 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 ITGB2P05107 769 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 SELPP16109 830 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 ARL4DP49703 201 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 ADGRE1Q14246 886 aa6.12□□□□□ -1.43
LINC01239-201ENST00000433645 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
LINC01239-201ENST00000433645 VN1R5Q7Z5H4 357 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms