RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 MMP10P09238 476 aa12.76□□□□□ -0.37
NEFM-202ENST00000433454 ZAP70P43403 619 aa12.76□□□□□ -0.37
NEFM-202ENST00000433454 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
NEFM-202ENST00000433454 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
NEFM-202ENST00000433454 RABEP1Q15276 862 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 ANKRD31Q8N7Z5 1873 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
NEFM-202ENST00000433454 KCNJ4P48050 445 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 ANAPC15P60006 121 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 TTF1Q15361 905 aaPredicted RBP12.75□□□□□ -0.37
NEFM-202ENST00000433454 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 PI16Q6UXB8 463 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 DEFB132Q7Z7B7 95 aa12.75□□□□□ -0.37
NEFM-202ENST00000433454 MYH7P12883 1935 aa12.74□□□□□ -0.37
NEFM-202ENST00000433454 HSPA4P34932 840 aa12.74□□□□□ -0.37
NEFM-202ENST00000433454 BRIP1Q9BX63 1249 aa12.74□□□□□ -0.37
NEFM-202ENST00000433454 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
NEFM-202ENST00000433454 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
NEFM-202ENST00000433454 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 BCAMP50895 628 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 RNF113AO15541 343 aaKnown RBP12.73□□□□□ -0.37
NEFM-202ENST00000433454 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
NEFM-202ENST00000433454 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 ZNF589Q86UQ0 364 aaPredicted RBP12.73□□□□□ -0.37
NEFM-202ENST00000433454 SNX21Q969T3 373 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEFM-202ENST00000433454 HELLSQ9NRZ9 838 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
NEFM-202ENST00000433454 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
NEFM-202ENST00000433454 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 CYP2E1P05181 493 aaPredicted RBP12.72□□□□□ -0.37
NEFM-202ENST00000433454 PTH1RQ03431 593 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 XDHP47989 1333 aa12.72□□□□□ -0.37
NEFM-202ENST00000433454 BBOX1O75936 387 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 CHGBP05060 677 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 PDE6BP35913 854 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 ZSCAN25Q6NSZ9 544 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 DOCK2Q92608 1830 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 GYG1P46976 350 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 MAP4K1Q92918 833 aa12.71□□□□□ -0.37
NEFM-202ENST00000433454 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
NEFM-202ENST00000433454 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 PIH1D3Q9NQM4 214 aaKnown RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 LEMD3Q9Y2U8 911 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 ST18O60284 1047 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 NPR1P16066 1061 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 APPBP2Q92624 585 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 RBM8AQ9Y5S9 174 aaKnown RBP12.7□□□□□ -0.38
NEFM-202ENST00000433454 LRRC37AA6NMS7 1700 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 MAST3O60307 1309 aa12.7□□□□□ -0.38
NEFM-202ENST00000433454 SRGNP10124 158 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
NEFM-202ENST00000433454 MYO5AQ9Y4I1 1855 aaKnown RBP12.69□□□□□ -0.38
NEFM-202ENST00000433454 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 SEMA3EO15041 775 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 KLRK1P26718 216 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 SLFNL1Q499Z3 407 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 SLC9C2Q5TAH2 1124 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 RNF20Q5VTR2 975 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
NEFM-202ENST00000433454 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
NEFM-202ENST00000433454 ZKSCAN1P17029 563 aaPredicted RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 ADD2P35612 726 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 DENND2AQ9ULE3 1009 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 COL1A1P02452 1464 aaPredicted RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
NEFM-202ENST00000433454 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
NEFM-202ENST00000433454 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
NEFM-202ENST00000433454 M0R2C6 588 aa12.67□□□□□ -0.38
NEFM-202ENST00000433454 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
NEFM-202ENST00000433454 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
NEFM-202ENST00000433454 GPSM2P81274 684 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms