RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MAST3O60307 1309 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 C4AP0C0L4 1744 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 M0R2C6 588 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 TCEANC2Q96MN5 208 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 MYH7P12883 1935 aa19.97■□□□□ 0.79
USHBP1-203ENST00000431146 RPAP1Q9BWH6 1393 aaPredicted RBP19.96■□□□□ 0.79
USHBP1-203ENST00000431146 OSBP2Q969R2 916 aa19.96■□□□□ 0.79
USHBP1-203ENST00000431146 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
USHBP1-203ENST00000431146 RTL9Q8NET4 1388 aa19.96■□□□□ 0.79
USHBP1-203ENST00000431146 TRIM37O94972 964 aa19.96■□□□□ 0.79
USHBP1-203ENST00000431146 LARGE1O95461 756 aa19.96■□□□□ 0.79
USHBP1-203ENST00000431146 NBPF5PQ86XG9 351 aaPredicted RBP19.96■□□□□ 0.79
USHBP1-203ENST00000431146 ARAP2Q8WZ64 1704 aa19.95■□□□□ 0.78
USHBP1-203ENST00000431146 CYP2E1P05181 493 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-203ENST00000431146 WASHC4Q2M389 1173 aa19.95■□□□□ 0.78
USHBP1-203ENST00000431146 KRT27Q7Z3Y8 459 aa19.95■□□□□ 0.78
USHBP1-203ENST00000431146 DTNBO60941 627 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 SLC5A1P13866 664 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 RFC4P35249 363 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 CHRNDQ07001 517 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 A0A0G2JLW4 131 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 CYP21A2P08686 494 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
USHBP1-203ENST00000431146 FOXD4L5Q5VV16 416 aaPredicted RBP19.94■□□□□ 0.78
USHBP1-203ENST00000431146 FOXD4L4Q8WXT5 416 aaPredicted RBP19.94■□□□□ 0.78
USHBP1-203ENST00000431146 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
USHBP1-203ENST00000431146 WTIPA6NIX2 430 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 NUCB2P80303 420 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 CDC5LQ99459 802 aaKnown RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 PIH1D3Q9NQM4 214 aaKnown RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 HMG20BQ9P0W2 317 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 ZDHHC9Q9Y397 364 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 PSMA5P28066 241 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 SF3B3Q15393 1217 aaKnown RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 BLOC1S2Q6QNY1 142 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 INTS4Q96HW7 963 aaKnown RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 ZNF512BQ96KM6 892 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-203ENST00000431146 GBP4Q96PP9 640 aa19.93■□□□□ 0.78
USHBP1-203ENST00000431146 ANKRD18AQ8IVF6 992 aa19.92■□□□□ 0.78
USHBP1-203ENST00000431146 CELF1Q92879 486 aaKnown RBP19.92■□□□□ 0.78
USHBP1-203ENST00000431146 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
USHBP1-203ENST00000431146 PUS7LQ9H0K6 701 aaKnown RBP19.92■□□□□ 0.78
USHBP1-203ENST00000431146 BCAMP50895 628 aa19.91■□□□□ 0.78
USHBP1-203ENST00000431146 RGL2O15211 777 aa19.91■□□□□ 0.78
USHBP1-203ENST00000431146 IDH1O75874 414 aaKnown RBP19.91■□□□□ 0.78
USHBP1-203ENST00000431146 TSGA10IPQ3SY00 556 aa19.91■□□□□ 0.78
USHBP1-203ENST00000431146 SLC10A5Q5PT55 438 aa19.91■□□□□ 0.78
USHBP1-203ENST00000431146 DSCC1Q9BVC3 393 aa19.91■□□□□ 0.78
USHBP1-203ENST00000431146 NPHP1O15259 732 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 RASGRF1Q13972 1273 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 GSE1Q14687 1217 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 LRRFIP1Q32MZ4 808 aaKnown RBP19.9■□□□□ 0.78
USHBP1-203ENST00000431146 TICAM2Q86XR7 235 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.9■□□□□ 0.78
USHBP1-203ENST00000431146 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 ZFYP08048 801 aaPredicted RBP19.9■□□□□ 0.78
USHBP1-203ENST00000431146 UQCRFS1P1P0C7P4 283 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 SLC9C2Q5TAH2 1124 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 TTLL5Q6EMB2 1281 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 TPTE2Q6XPS3 522 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 CCDC83Q8IWF9 413 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 IL27Q8NEV9 243 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 CHAMP1Q96JM3 812 aa19.9■□□□□ 0.78
USHBP1-203ENST00000431146 A0A1B0GUL6 1792 aa19.89■□□□□ 0.78
USHBP1-203ENST00000431146 LAMA4Q16363 1823 aa19.89■□□□□ 0.78
USHBP1-203ENST00000431146 BAG4O95429 457 aaKnown RBP19.89■□□□□ 0.77
USHBP1-203ENST00000431146 UBR3Q6ZT12 1888 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 STOX1Q6ZVD7 989 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 SPATA5Q8NB90 893 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 APPBP2Q92624 585 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 NLRP3Q96P20 1036 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 TPCN1Q9ULQ1 816 aa19.89■□□□□ 0.77
USHBP1-203ENST00000431146 FOXP2O15409 715 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 ME3Q16798 604 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.88■□□□□ 0.77
USHBP1-203ENST00000431146 IQSEC3Q9UPP2 1182 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-203ENST00000431146 ADD2P35612 726 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 NFIXQ14938 502 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 TTF1Q15361 905 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-203ENST00000431146 BSDC1Q9NW68 430 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-203ENST00000431146 WWC3Q9ULE0 1092 aa19.88■□□□□ 0.77
USHBP1-203ENST00000431146 TRAK2O60296 914 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
USHBP1-203ENST00000431146 KRT32Q14532 448 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 GPAA1O43292 621 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 ST3GAL1Q11201 340 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 LRRC2Q9BYS8 371 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 MINPP1Q9UNW1 487 aa19.87■□□□□ 0.77
USHBP1-203ENST00000431146 TNRC6CQ9HCJ0 1690 aaKnown RBP19.86■□□□□ 0.77
USHBP1-203ENST00000431146 ZNF532Q9HCE3 1301 aa19.86■□□□□ 0.77
USHBP1-203ENST00000431146 GZF1Q9H116 711 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-203ENST00000431146 GYG1P46976 350 aa19.85■□□□□ 0.77
USHBP1-203ENST00000431146 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms