RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 PTPRCP08575 1304 aa15.85■□□□□ 0.13
SMPD4-204ENST00000430682 ZNF609O15014 1411 aa15.85■□□□□ 0.13
SMPD4-204ENST00000430682 RASSF10A6NK89 507 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 ZC3H15Q8WU90 426 aaKnown RBP15.84■□□□□ 0.13
SMPD4-204ENST00000430682 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
SMPD4-204ENST00000430682 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
SMPD4-204ENST00000430682 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
SMPD4-204ENST00000430682 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
SMPD4-204ENST00000430682 ZNF280AP59817 542 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-204ENST00000430682 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
SMPD4-204ENST00000430682 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
SMPD4-204ENST00000430682 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
SMPD4-204ENST00000430682 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
SMPD4-204ENST00000430682 RABL6Q3YEC7 729 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-204ENST00000430682 AGBL3Q8NEM8 1001 aa15.82■□□□□ 0.12
SMPD4-204ENST00000430682 ADM5C9JUS6 153 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
SMPD4-204ENST00000430682 CCDC57Q2TAC2 916 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 KIF4BQ2VIQ3 1234 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 LDHAL6AQ6ZMR3 332 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 CDC37L1Q7L3B6 337 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 THSD7BQ9C0I4 1608 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 COA1Q9GZY4 146 aa15.81■□□□□ 0.12
SMPD4-204ENST00000430682 ABT1Q9ULW3 272 aaKnown RBP15.81■□□□□ 0.12
SMPD4-204ENST00000430682 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SMPD4-204ENST00000430682 PLIN1O60240 522 aa15.8■□□□□ 0.12
SMPD4-204ENST00000430682 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
SMPD4-204ENST00000430682 KLHDC4Q8TBB5 520 aa15.8■□□□□ 0.12
SMPD4-204ENST00000430682 CD209Q9NNX6 404 aa15.8■□□□□ 0.12
SMPD4-204ENST00000430682 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
SMPD4-204ENST00000430682 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
SMPD4-204ENST00000430682 TLL2Q9Y6L7 1015 aa15.8■□□□□ 0.12
SMPD4-204ENST00000430682 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 BRPF1P55201 1214 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-204ENST00000430682 GTF2IP78347 998 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 SCARF1Q14162 830 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 COL13A1Q5TAT6 717 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-204ENST00000430682 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 CYP4F22Q6NT55 531 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
SMPD4-204ENST00000430682 CERS5Q8N5B7 392 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 ZNF408Q9H9D4 720 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 ECM29Q5VYK3 1845 aa15.79■□□□□ 0.12
SMPD4-204ENST00000430682 WDR33Q9C0J8 1336 aaKnown RBP15.78■□□□□ 0.12
SMPD4-204ENST00000430682 CT47B1P0C2W7 299 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-204ENST00000430682 KCNJ4P48050 445 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 NBPF9Q3BBW0 867 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 KRT26Q7Z3Y9 468 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 SAPCD2Q86UD0 394 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
SMPD4-204ENST00000430682 RFX5P48382 616 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-204ENST00000430682 ANGEL2Q5VTE6 544 aaKnown RBP15.77■□□□□ 0.12
SMPD4-204ENST00000430682 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
SMPD4-204ENST00000430682 FOXN1O15353 648 aa15.76■□□□□ 0.11
SMPD4-204ENST00000430682 AOC2O75106 756 aa15.76■□□□□ 0.11
SMPD4-204ENST00000430682 IL1R1P14778 569 aa15.76■□□□□ 0.11
SMPD4-204ENST00000430682 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
SMPD4-204ENST00000430682 CAPNS2Q96L46 248 aa15.76■□□□□ 0.11
SMPD4-204ENST00000430682 PCDHAC2Q9Y5I4 1007 aa15.76■□□□□ 0.11
SMPD4-204ENST00000430682 ARAP2Q8WZ64 1704 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 MYH13Q9UKX3 1938 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 BCAR3O75815 825 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 GYG1P46976 350 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMPD4-204ENST00000430682 GRM1Q13255 1194 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 KIAA0825Q8IV33 1275 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 VGLL2Q8N8G2 317 aa15.75■□□□□ 0.11
SMPD4-204ENST00000430682 ZBED3Q96IU2 234 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-204ENST00000430682 AOX1Q06278 1338 aa15.74■□□□□ 0.11
SMPD4-204ENST00000430682 WNT10BO00744 389 aa15.74■□□□□ 0.11
SMPD4-204ENST00000430682 SASH1O94885 1247 aa15.74■□□□□ 0.11
SMPD4-204ENST00000430682 FAM84BQ96KN1 310 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-204ENST00000430682 ZIC5Q96T25 663 aa15.74■□□□□ 0.11
SMPD4-204ENST00000430682 WBP1LQ9NX94 342 aa15.74■□□□□ 0.11
SMPD4-204ENST00000430682 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
SMPD4-204ENST00000430682 UBE4AQ14139 1066 aa15.73■□□□□ 0.11
SMPD4-204ENST00000430682 PRAMEF18Q5VWM3 479 aa15.73■□□□□ 0.11
SMPD4-204ENST00000430682 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-204ENST00000430682 CDCA5Q96FF9 252 aa15.73■□□□□ 0.11
SMPD4-204ENST00000430682 MEIS3Q99687 375 aa15.73■□□□□ 0.11
SMPD4-204ENST00000430682 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
SMPD4-204ENST00000430682 IFFO2Q5TF58 517 aa15.72■□□□□ 0.11
SMPD4-204ENST00000430682 ATG9AQ7Z3C6 839 aa15.72■□□□□ 0.11
SMPD4-204ENST00000430682 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
SMPD4-204ENST00000430682 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
SMPD4-204ENST00000430682 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
SMPD4-204ENST00000430682 HUNKP57058 714 aa15.71■□□□□ 0.11
SMPD4-204ENST00000430682 GRIK5Q16478 980 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms