RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 EYSQ5T1H1 3165 aa13.12□□□□□ -0.31
ATG4B-212ENST00000430617 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-212ENST00000430617 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
ATG4B-212ENST00000430617 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
ATG4B-212ENST00000430617 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
ATG4B-212ENST00000430617 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
ATG4B-212ENST00000430617 NF2P35240 595 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 INHBEP58166 350 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 SP3Q02447 781 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 ARMC9Q7Z3E5 817 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 DPF3Q92784 378 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-212ENST00000430617 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
ATG4B-212ENST00000430617 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
ATG4B-212ENST00000430617 WNT10BO00744 389 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATG4B-212ENST00000430617 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 SHISA4Q96DD7 197 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 WNK4Q96J92 1243 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 PTPN18Q99952 460 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 SPTBN5Q9NRC6 3674 aaKnown RBP13.1□□□□□ -0.31
ATG4B-212ENST00000430617 MGAMO43451 1857 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
ATG4B-212ENST00000430617 G3V3G9 751 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 UFL1O94874 794 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 SASH1O94885 1247 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
ATG4B-212ENST00000430617 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 ADAMTS8Q9UP79 889 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 MYH3P11055 1940 aa13.09□□□□□ -0.31
ATG4B-212ENST00000430617 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-212ENST00000430617 GJA5P36382 358 aa13.08□□□□□ -0.32
ATG4B-212ENST00000430617 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
ATG4B-212ENST00000430617 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
ATG4B-212ENST00000430617 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
ATG4B-212ENST00000430617 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-212ENST00000430617 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
ATG4B-212ENST00000430617 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG4B-212ENST00000430617 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
ATG4B-212ENST00000430617 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
ATG4B-212ENST00000430617 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-212ENST00000430617 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
ATG4B-212ENST00000430617 SEC31BQ9NQW1 1179 aa13.06□□□□□ -0.32
ATG4B-212ENST00000430617 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
ATG4B-212ENST00000430617 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
ATG4B-212ENST00000430617 MTFR1Q15390 333 aa13.05□□□□□ -0.32
ATG4B-212ENST00000430617 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
ATG4B-212ENST00000430617 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
ATG4B-212ENST00000430617 ARHGAP39Q9C0H5 1083 aa13.05□□□□□ -0.32
ATG4B-212ENST00000430617 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-212ENST00000430617 DACT2Q5SW24 774 aa13.04□□□□□ -0.32
ATG4B-212ENST00000430617 Q7L0L9 218 aa13.04□□□□□ -0.32
ATG4B-212ENST00000430617 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
ATG4B-212ENST00000430617 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
ATG4B-212ENST00000430617 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
ATG4B-212ENST00000430617 A0A1W2PPC1 479 aa13.03□□□□□ -0.32
ATG4B-212ENST00000430617 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-212ENST00000430617 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
ATG4B-212ENST00000430617 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
ATG4B-212ENST00000430617 APOBEC3FQ8IUX4 373 aaKnown RBP13.03□□□□□ -0.32
ATG4B-212ENST00000430617 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 OGFOD1Q8N543 542 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 DEFB123Q8N688 67 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 ZBED3Q96IU2 234 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-212ENST00000430617 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 DEFB129Q9H1M3 183 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 STAP2Q9UGK3 403 aa13.02□□□□□ -0.33
ATG4B-212ENST00000430617 COL1A1P02452 1464 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-212ENST00000430617 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
ATG4B-212ENST00000430617 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
ATG4B-212ENST00000430617 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
ATG4B-212ENST00000430617 STXBP5LQ9Y2K9 1186 aa13.01□□□□□ -0.33
ATG4B-212ENST00000430617 MUC3AQ02505 3323 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 A0A1B0GUL6 1792 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 ZNF521Q96K83 1311 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 FBXW7Q969H0 707 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 RUNDC1Q96C34 613 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 HTATIP2Q9BUP3 242 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 NR2E3Q9Y5X4 410 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 DOCK3Q8IZD9 2030 aa13□□□□□ -0.33
ATG4B-212ENST00000430617 XDHP47989 1333 aa12.99□□□□□ -0.33
ATG4B-212ENST00000430617 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-212ENST00000430617 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-212ENST00000430617 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-212ENST00000430617 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
ATG4B-212ENST00000430617 TAF1CQ15572 869 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-212ENST00000430617 NBPF12Q5TAG4 269 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-212ENST00000430617 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms